RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MRPS5P82675 430 aaKnown RBP14.94□□□□□ -0.02
PTPN9-201ENST00000306726 IL1RL1Q01638 556 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 OCRLQ01968 901 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 FAM160B1Q5W0V3 765 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 MFSD3Q96ES6 412 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 GALNT8Q9NY28 637 aa14.94□□□□□ -0.02
PTPN9-201ENST00000306726 FAM149AA5PLN7 773 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 TK2O00142 265 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 CLDN5O00501 218 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 PPEF2O14830 753 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 BPGMP07738 259 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 HOXD10P28358 340 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 PTP4A2Q12974 167 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 POU6F1Q14863 301 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 SLC9B1Q4ZJI4 515 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 BRSK2Q8IWQ3 736 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 FERMT1Q9BQL6 677 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 PCDHAC1Q9H158 963 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 COG4Q9H9E3 785 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 SYBUQ9NX95 663 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 DNAJA2O60884 412 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 ZC3H11AO75152 810 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTPN9-201ENST00000306726 FESP07332 822 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 PRMT2P55345 433 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 MARK2Q7KZI7 788 aaKnown RBP14.93□□□□□ -0.02
PTPN9-201ENST00000306726 TDRD5Q8NAT2 981 aaKnown RBP14.93□□□□□ -0.02
PTPN9-201ENST00000306726 PPP2R3CQ969Q6 453 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 SKA1Q96BD8 255 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 CCT7Q99832 543 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 TXNRD2Q9NNW7 524 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 THAP1Q9NVV9 213 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 C15orf38-AP3S2A0A0A6YYH1 394 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 NEMP2A6NFY4 417 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 DFFAO00273 331 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 PMPCBO75439 489 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 TCEA3O75764 348 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 TXNP10599 105 aaKnown RBP14.93□□□□□ -0.02
PTPN9-201ENST00000306726 TGM2P21980 687 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 NR4A1P22736 598 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 SULT1E1P49888 294 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 CSE1LP55060 971 aaKnown RBP14.93□□□□□ -0.02
PTPN9-201ENST00000306726 PLOD1Q02809 727 aaPredicted RBP14.93□□□□□ -0.02
PTPN9-201ENST00000306726 GRB14Q14449 540 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 CERCAMQ5T4B2 595 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 OR52E8Q6IFG1 317 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 ZNF280DQ6N043 979 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 ARPINQ7Z6K5 226 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 MFN1Q8IWA4 741 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 MYO1HQ8N1T3 1032 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 PLD6Q8N2A8 252 aaKnown RBP14.93□□□□□ -0.02
PTPN9-201ENST00000306726 C1orf127Q8N9H9 656 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 RPL10LQ96L21 214 aaKnown RBP14.93□□□□□ -0.02
PTPN9-201ENST00000306726 APBA2Q99767 749 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 SLC39A3Q9BRY0 314 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 CNPY3Q9BT09 278 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 BEGAINQ9BUH8 593 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 PDGFCQ9NRA1 345 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 KCNK4Q9NYG8 393 aa14.93□□□□□ -0.02
PTPN9-201ENST00000306726 DNAJC25-GNG10A0A024R161 153 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 A0A1B0GTW7 788 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 GPR25O00155 361 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 AKAP10O43572 662 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 ALDH1A3P47895 512 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 PITX1P78337 314 aaPredicted RBP14.92□□□□□ -0.02
PTPN9-201ENST00000306726 S100A14Q9HCY8 104 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 POMPQ9Y244 141 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 A0A096LPK6 155 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 RNF103-CHMP3A0A140T963 221 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 RNF103O00237 685 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 WFS1O76024 890 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 P4HA1P13674 534 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 SLC25A11Q02978 314 aaKnown RBP14.92□□□□□ -0.02
PTPN9-201ENST00000306726 CTBP1Q13363 440 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 GPR142Q7Z601 462 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 IPMKQ8NFU5 416 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 LTFP02788 710 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 CHRM1P11229 460 aaPredicted RBP14.92□□□□□ -0.02
PTPN9-201ENST00000306726 VAV1P15498 845 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 RGS2P41220 211 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 TMEM132DQ14C87 1099 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 DGKDQ16760 1214 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 KIF19Q2TAC6 998 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 ABHD15Q6UXT9 468 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 VCPIP1Q96JH7 1222 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 NT5C1AQ9BXI3 368 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 DPEP3Q9H4B8 488 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 LRRC4Q9HBW1 653 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 TCF7L2Q9NQB0 619 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 CDH22Q9UJ99 828 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 PIGNO95427 931 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 CRHR2Q13324 411 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 RPS6KA2Q15349 733 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 MTHFD1LQ6UB35 978 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 EGFL6Q8IUX8 553 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 ADGRF2Q8IZF7 708 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 CCDC185Q8N715 623 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 RDM1Q8NG50 284 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 SEPT1Q8WYJ6 367 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 HDAC11Q96DB2 347 aa14.92□□□□□ -0.02
PTPN9-201ENST00000306726 RUVBL2Q9Y230 463 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms