RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 I6L893 689 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZBTB24O43167 697 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CREB3O43889 395 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 LRCH4O75427 683 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ALDH1A2O94788 518 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NDUFA10O95299 355 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PAPSS2O95340 614 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ASLP04424 464 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HOXB2P14652 356 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MIPP30301 263 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 OR1E1P30953 314 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NTSR1P30989 418 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PCK1P35558 622 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CSKP41240 450 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MAGEA1P43355 309 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TPI1P60174 286 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ST8SIA6P61647 398 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 STARD3Q14849 445 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HADHQ16836 314 aaKnown RBP11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FUT11Q495W5 492 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 C5orf22Q49AR2 442 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FNDC3BQ53EP0 1204 aaKnown RBP11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ERMARDQ5T6L9 678 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 EMC10Q5UCC4 262 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZC3H14Q6PJT7 736 aaKnown RBP11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MAMSTRQ6ZN01 415 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TXLNBQ8N3L3 684 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NIPA2Q8N8Q9 360 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 IL17RCQ8NAC3 791 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PRSS33Q8NF86 280 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TSTD1Q8NFU3 115 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 BTBD6Q96KE9 485 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HHIPQ96QV1 700 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 EIF3CQ99613 913 aaKnown RBP11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SNRNP25Q9BV90 132 aaKnown RBP11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MUC3BQ9H195 1237 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DHX35Q9H5Z1 703 aaKnown RBP11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CATSPERBQ9H7T0 1116 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZDHHC4Q9NPG8 344 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MPP6Q9NZW5 540 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 USP18Q9UMW8 372 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PLA2G4CQ9UP65 541 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TRIOO75962 3097 aa11.32□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PLXND1Q9Y4D7 1925 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 IGLV3-10A0A075B6K4 115 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DRGXA6NNA5 263 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TMEM110-MUSTN1A8MSY1 372 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 H0Y858 1186 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SGK1O00141 431 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DAPK3O43293 454 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SYNCRIPO60506 623 aaKnown RBP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CNTN5O94779 1100 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 LRIG2O94898 1065 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HNRNPLP14866 589 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FECHP22830 423 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 EPHB2P29323 1055 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 L1CAMP32004 1257 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HTR7P34969 479 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NNMTP40261 264 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 WASP42768 502 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NOP2P46087 812 aaKnown RBP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 IRAK1P51617 712 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DGKEP52429 567 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SULT2A1Q06520 285 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZNF234Q14588 700 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PLEKHG6Q3KR16 790 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZNF528Q3MIS6 628 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ALFQ53S48 1182 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FSCBQ5H9T9 825 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PITRM1Q5JRX3 1037 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SERPINA13PQ6UXR4 307 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 KIAA0907Q7Z7F0 614 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SETD3Q86TU7 594 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PSTKQ8IV42 348 aaKnown RBP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CAMKK1Q8N5S9 505 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CCDC112Q8NEF3 446 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SLC35G2Q8TBE7 412 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CYB5D2Q8WUJ1 264 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HSPH1Q92598 858 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ATOH1Q92858 354 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FAM126AQ9BYI3 521 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RETREG1Q9H6L5 497 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZWILCHQ9H900 591 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 OSGEPQ9NPF4 335 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CACNA2D2Q9NY47 1150 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DONSONQ9NYP3 566 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 BCCIPQ9P287 314 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 THAP10Q9P2Z0 257 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SLC25A13Q9UJS0 675 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 VPS28Q9UK41 221 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PCDHA13Q9Y5I0 950 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 EPN1Q9Y6I3 576 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NUP205Q92621 2012 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CEP192Q8TEP8 1941 aa11.31□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SHROOM3Q8TF72 1996 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TCRBV21S2A2A0A5A6 115 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 EEF2KO00418 725 aaKnown RBP11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FGF10O15520 208 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PROSCO94903 275 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms