RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 PLD4Q96BZ4 506 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 FAM167BQ9BTA0 163 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 INSL5Q9Y5Q6 135 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 UBR3Q6ZT12 1888 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 KANSL1LA0AUZ9 987 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 ADAMTS4O75173 837 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 CYP1A2P05177 515 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 NCF2P19878 526 aaPredicted RBP9.47□□□□□ -0.89
PTPRE-202ENST00000306042 TACR2P21452 398 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 HALP42357 657 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 DGKGP49619 791 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 LIG3P49916 1009 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 RFWD3Q6PCD5 774 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 UPF3AQ9H1J1 476 aaKnown RBP9.47□□□□□ -0.89
PTPRE-202ENST00000306042 TASP1Q9H6P5 420 aa9.47□□□□□ -0.89
PTPRE-202ENST00000306042 POLMQ9NP87 494 aaPredicted RBP9.47□□□□□ -0.89
PTPRE-202ENST00000306042 SUN1O94901 812 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 TTC4O95801 387 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 ADRA1BP35368 520 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 LRRC32Q14392 662 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 TTC39BQ5VTQ0 682 aaPredicted RBP9.46□□□□□ -0.89
PTPRE-202ENST00000306042 NUDCD3Q8IVD9 361 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 LNX1Q8TBB1 728 aaPredicted RBP9.46□□□□□ -0.89
PTPRE-202ENST00000306042 MAML1Q92585 1016 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 AHCYL2Q96HN2 611 aaKnown RBP9.46□□□□□ -0.89
PTPRE-202ENST00000306042 LPIN3Q9BQK8 851 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 RAD18Q9NS91 495 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.46□□□□□ -0.89
PTPRE-202ENST00000306042 GOT1P17174 413 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 GJA1P17302 382 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 PCK1P35558 622 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 MAPK9P45984 424 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 C21orf59P57076 290 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 RCN2Q14257 317 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 MEA1Q16626 185 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 LRRC38Q5VT99 294 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 ARHGAP17Q68EM7 881 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 SLC26A9Q7LBE3 791 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 TMCO2Q7Z6W1 182 aaPredicted RBP9.46□□□□□ -0.89
PTPRE-202ENST00000306042 KATNAL2Q8IYT4 538 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 CELF5Q8N6W0 485 aaKnown RBP9.46□□□□□ -0.89
PTPRE-202ENST00000306042 PHOSPHO2Q8TCD6 241 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 STK32AQ8WU08 396 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.46□□□□□ -0.892e-7■■■■■ 64.2
PTPRE-202ENST00000306042 TMEM159Q96B96 161 aa9.46□□□□□ -0.89
PTPRE-202ENST00000306042 MLPHQ9BV36 600 aaPredicted RBP9.46□□□□□ -0.89
PTPRE-202ENST00000306042 APOBEC3GQ9HC16 384 aaKnown RBP9.46□□□□□ -0.89
PTPRE-202ENST00000306042 MBLAC1A4D2B0 266 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-202ENST00000306042 PPEF2O14830 753 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 BRAFP15056 766 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 MMP8P22894 467 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 SEC13P55735 322 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 CAP1Q01518 475 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 PTK2BQ14289 1009 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 HIST2H2ACQ16777 129 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-202ENST00000306042 HIST2H2AA3Q6FI13 130 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 PTAR1Q7Z6K3 402 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-202ENST00000306042 DDIASQ8IXT1 998 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 C10orf67Q8IYJ2 551 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 ADAM33Q9BZ11 813 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 CASS4Q9NQ75 786 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 CALCOCO1Q9P1Z2 691 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 NCDNQ9UBB6 729 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 PCDHGC3Q9UN70 934 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 SHOC2Q9UQ13 582 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 TELO2Q9Y4R8 837 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 KAT6AQ92794 2004 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 ASPAP45381 313 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 DAOAP59103 153 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 TRIP4Q15650 581 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-202ENST00000306042 MYO1HQ8N1T3 1032 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 C12orf50Q8NA57 414 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-202ENST00000306042 SCAMP5Q8TAC9 235 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 RNF217Q8TC41 542 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 PRKD2Q9BZL6 878 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 SFXN1Q9H9B4 322 aa9.46□□□□□ -0.9
PTPRE-202ENST00000306042 EML4Q9HC35 981 aaKnown RBP9.46□□□□□ -0.9
PTPRE-202ENST00000306042 AGO1Q9UL18 857 aaKnown RBP9.46□□□□□ -0.9
PTPRE-202ENST00000306042 A0A1B0GVM2 712 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 TARSL2A2RTX5 802 aaKnown RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 TCAF2A6NFQ2 919 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 MGEA5O60502 916 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 CCNB1P14635 433 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 ZNF7P17097 686 aaPredicted RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 TPH1P17752 444 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 WDR5P61964 334 aaKnown RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 GHRHRQ02643 423 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 CAMK2GQ13555 558 aaPredicted RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 TEAD4Q15561 434 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 KYNUQ16719 465 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 PRR23CQ6ZRP0 262 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 PDCD7Q8N8D1 485 aaKnown RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 TRPV1Q8NER1 839 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 BAP1Q92560 729 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 EXOC2Q96KP1 924 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 SEMA3CQ99985 751 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 ZNF670Q9BS34 389 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 DDX23Q9BUQ8 820 aaKnown RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 SENP1Q9P0U3 644 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 IGKV6-21A0A0C4DH24 114 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms