RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RWDD4Q6NW29 188 aaKnown RBP6.72□□□□□ -1.33
USP47-201ENST00000305481 LVRNQ6Q4G3 990 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 MICALCLQ6ZW33 695 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 PDZD4Q76G19 769 aaPredicted RBP6.72□□□□□ -1.33
USP47-201ENST00000305481 C14orf80Q86SX3 495 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 CTAGE3PQ8IX95 158 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 ABI1Q8IZP0 508 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 CNTD1Q8N815 330 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 TCP10LQ8TDR4 215 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 STAMBPL1Q96FJ0 436 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 AGAP3Q96P47 875 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 DEFB118Q96PH6 123 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 MLPHQ9BV36 600 aaPredicted RBP6.72□□□□□ -1.33
USP47-201ENST00000305481 KLHL8Q9P2G9 620 aaPredicted RBP6.72□□□□□ -1.33
USP47-201ENST00000305481 SLC17A7Q9P2U7 560 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 SLC27A5Q9Y2P5 690 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 PCDHB5Q9Y5E4 795 aa6.72□□□□□ -1.33
USP47-201ENST00000305481 PLXNA3P51805 1871 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 MYO16Q9Y6X6 1858 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 IQANK1A0A1B0GTG1 560 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 PQBP1O60828 265 aaKnown RBP6.71□□□□□ -1.33
USP47-201ENST00000305481 USP12O75317 370 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 SUN1O94901 812 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 MT-ND3P03897 115 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 PYGBP11216 843 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 CYP2C18P33260 490 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 MAGEA11P43364 429 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 SLC18A2Q05940 514 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 PPP2R5DQ14738 602 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 NFE2Q16621 373 aaPredicted RBP6.71□□□□□ -1.33
USP47-201ENST00000305481 RGS9BPQ6ZS82 235 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 CYS1Q717R9 158 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 MON1AQ86VX9 555 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 SLC39A13Q96H72 371 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 SLCO1B3Q9NPD5 702 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 SYBUQ9NX95 663 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 GMIPQ9P107 970 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 SLC17A6Q9P2U8 582 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 PRKAG3Q9UGI9 489 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 ZNF180Q9UJW8 692 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 HS3ST4Q9Y661 456 aa6.71□□□□□ -1.33
USP47-201ENST00000305481 SHROOM3Q8TF72 1996 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 FAM92AA1XBS5 289 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 RFPL1O75677 317 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 ZWINTO95229 277 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 AP2A1O95782 977 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 TBX18O95935 607 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 GALTP07902 379 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 MX2P20592 715 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 NEK3P51956 506 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 SARNPP82979 210 aaKnown RBP6.71□□□□□ -1.34
USP47-201ENST00000305481 DNAJC3Q13217 504 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 ITIH4Q14624 930 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 PDK4Q16654 411 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 TEX44Q53QW1 395 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 RNF187Q5TA31 235 aaPredicted RBP6.71□□□□□ -1.34
USP47-201ENST00000305481 PIK3R6Q5UE93 754 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 TTC39BQ5VTQ0 682 aaPredicted RBP6.71□□□□□ -1.34
USP47-201ENST00000305481 RNF19BQ6ZMZ0 732 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 CDHR3Q6ZTQ4 885 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 FAM47EQ6ZV65 393 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 C10orf67Q8IYJ2 551 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 ZNF683Q8IZ20 524 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 OTUD6BQ8N6M0 293 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 OR52K1Q8NGK4 314 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 SEPT8Q92599 483 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 TEKT5Q96M29 485 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 FCRL3Q96P31 734 aaPredicted RBP6.71□□□□□ -1.34
USP47-201ENST00000305481 FERMT1Q9BQL6 677 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 BRD8Q9H0E9 1235 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 GBA3Q9H227 469 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 SAMD15Q9P1V8 674 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 IKBKGQ9Y6K9 419 aa6.71□□□□□ -1.34
USP47-201ENST00000305481 TRIM49D1C9J1S8 452 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 MAFKO60675 156 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 MOCS2O96007 188 aaPredicted RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 JCHAINP01591 159 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 DHRS4L1P0CG22 281 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 NFKB1P19838 968 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 SERPINB6P35237 376 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 ETV4P43268 484 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 LIG3P49916 1009 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 MNX1P50219 401 aaPredicted RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 ATN1P54259 1190 aaPredicted RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 CCL23P55773 120 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 ARPP19P56211 112 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 BMPR2Q13873 1038 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 AFMIDQ63HM1 303 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 MSANTD2Q6P1R3 559 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 CASC4Q6P4E1 433 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 FUT10Q6P4F1 479 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 NPAS4Q8IUM7 802 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 VWCEQ96DN2 955 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 SEZ6LQ9BYH1 1024 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 SLC39A8Q9C0K1 460 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 NSRP1Q9H0G5 558 aaKnown RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 IL1RAPL1Q9NZN1 696 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 MPP6Q9NZW5 540 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 OGDHLQ9ULD0 1010 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 TLR6Q9Y2C9 796 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms