RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 C9IYK1 514 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 CREB3O43889 395 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 AP2A1O95782 977 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 KCNA4P22459 653 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 ADRA1BP35368 520 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 ZNF135P52742 658 aaPredicted RBP24.66■■□□□ 1.54
FOXA3-201ENST00000302177 GJA9P57773 515 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 AP2B1P63010 937 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 UBXN11Q5T124 520 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 TMCO4Q5TGY1 634 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 CST9Q5W186 159 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 AAGABQ6PD74 315 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 OSTM1Q86WC4 334 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 SIX6OS1Q8N1H7 587 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 SORT1Q99523 831 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 RBBP8Q99708 897 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 BFARQ9NZS9 450 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 TMEM216Q9P0N5 145 aa24.66■■□□□ 1.54
FOXA3-201ENST00000302177 PIN4Q9Y237 131 aaKnown RBP24.66■■□□□ 1.54
FOXA3-201ENST00000302177 USP1O94782 785 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 MPOP05164 745 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 RALBP11234 206 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 SERPINB8P50452 374 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 APLP1P51693 650 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 ABCE1P61221 599 aaKnown RBP24.65■■□□□ 1.54
FOXA3-201ENST00000302177 SOX4Q06945 474 aaPredicted RBP24.65■■□□□ 1.54
FOXA3-201ENST00000302177 SNX17Q15036 470 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 RIPOR1Q6ZS17 1223 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 PAQR9Q6ZVX9 377 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 ADGRG6Q86SQ4 1221 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 C10orf107Q8IVU9 208 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 PANX3Q96QZ0 392 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 KLK14Q9P0G3 267 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 SEPT10Q9P0V9 454 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 SLC17A6Q9P2U8 582 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 GABRDO14764 452 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 LYPLA1O75608 230 aaPredicted RBP24.65■■□□□ 1.54
FOXA3-201ENST00000302177 CPA3P15088 417 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 IDH3AP50213 366 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 LIMK2P53671 638 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 MXRA7P84157 204 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 SEMA3BQ13214 749 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 IRF5Q13568 498 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 UBAP2LQ14157 1087 aaKnown RBP24.65■■□□□ 1.54
FOXA3-201ENST00000302177 GPR142Q7Z601 462 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.65■■□□□ 1.54
FOXA3-201ENST00000302177 DTX3LQ8TDB6 740 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 VCXQ9H320 206 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 CASS4Q9NQ75 786 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 TRHDEQ9UKU6 1024 aa24.65■■□□□ 1.54
FOXA3-201ENST00000302177 ERVK-10P10266 1014 aa24.64■■□□□ 1.54
FOXA3-201ENST00000302177 ANPEPP15144 967 aa24.64■■□□□ 1.54
FOXA3-201ENST00000302177 PTPN3P26045 913 aa24.64■■□□□ 1.54
FOXA3-201ENST00000302177 PITX1P78337 314 aaPredicted RBP24.64■■□□□ 1.54
FOXA3-201ENST00000302177 ADAM17P78536 824 aa24.64■■□□□ 1.54
FOXA3-201ENST00000302177 PPIDQ08752 370 aaKnown RBP24.64■■□□□ 1.54
FOXA3-201ENST00000302177 MDH1BQ5I0G3 518 aa24.64■■□□□ 1.54
FOXA3-201ENST00000302177 SYPL2Q5VXT5 272 aa24.64■■□□□ 1.54
FOXA3-201ENST00000302177 CLEC20AQ6ZU45 233 aa24.64■■□□□ 1.54
FOXA3-201ENST00000302177 NDRG1Q92597 394 aaKnown RBP24.64■■□□□ 1.54
FOXA3-201ENST00000302177 PGAP3Q96FM1 320 aaPredicted RBP24.64■■□□□ 1.54
FOXA3-201ENST00000302177 SNX15Q9NRS6 342 aa24.64■■□□□ 1.54
FOXA3-201ENST00000302177 PIGVQ9NUD9 493 aa24.64■■□□□ 1.54
FOXA3-201ENST00000302177 KLHL8Q9P2G9 620 aaPredicted RBP24.64■■□□□ 1.54
FOXA3-201ENST00000302177 F5H423 210 aaPredicted RBP24.63■■□□□ 1.53
FOXA3-201ENST00000302177 AP3B1O00203 1094 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 ZNF195O14628 629 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 SIN3BO75182 1162 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 CELF2O95319 508 aaKnown RBP24.63■■□□□ 1.53
FOXA3-201ENST00000302177 MLH1P40692 756 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 NPY2RP49146 381 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 HIC1Q14526 733 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 BSPRYQ5W0U4 402 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 FCRL3Q96P31 734 aaPredicted RBP24.63■■□□□ 1.53
FOXA3-201ENST00000302177 VAT1Q99536 393 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 RNF39Q9H2S5 420 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 RNF19AQ9NV58 838 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 RRN3Q9NYV6 651 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 A0A088AWK7 358 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 C6orf222P0C671 652 aaPredicted RBP24.63■■□□□ 1.53
FOXA3-201ENST00000302177 ERCC2P18074 760 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 PRDX6P30041 224 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 NME3Q13232 169 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 KCTD11Q693B1 232 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 OR52K1Q8NGK4 314 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 CMTM5Q96DZ9 223 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 ZNF184Q99676 751 aaPredicted RBP24.63■■□□□ 1.53
FOXA3-201ENST00000302177 TMPRSS4Q9NRS4 437 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 KRT82Q9NSB4 513 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 DDX43Q9NXZ2 648 aaKnown RBP24.63■■□□□ 1.53
FOXA3-201ENST00000302177 VANGL2Q9ULK5 521 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 PCDHB12Q9Y5F1 795 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 CDY2AQ9Y6F7 541 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 CDY1Q9Y6F8 540 aa24.63■■□□□ 1.53
FOXA3-201ENST00000302177 PCNTO95613 3336 aa24.62■■□□□ 1.53
FOXA3-201ENST00000302177 TMEM114B3SHH9 223 aa24.62■■□□□ 1.53
FOXA3-201ENST00000302177 H2AFYO75367 372 aaKnown RBP24.62■■□□□ 1.53
FOXA3-201ENST00000302177 BEST1O76090 585 aa24.62■■□□□ 1.53
FOXA3-201ENST00000302177 LINGO3P0C6S8 592 aa24.62■■□□□ 1.53
FOXA3-201ENST00000302177 DNAJB2P25686 324 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms