RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 YME1L1Q96TA2 773 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 UBXN6Q9BZV1 441 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 FBXO6Q9NRD1 293 aaPredicted RBP12.59□□□□□ -0.39
ABCA3-201ENST00000301732 HMGCRP04035 888 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 MYL12AP19105 171 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 ZNF157P51786 506 aaPredicted RBP12.59□□□□□ -0.39
ABCA3-201ENST00000301732 ARHGEF6Q15052 776 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 ANKS6Q68DC2 871 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 KRT74Q7RTS7 529 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 SLC4A5Q9BY07 1137 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 EPORP19235 508 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 C15orf59Q2T9L4 293 aaPredicted RBP12.59□□□□□ -0.39
ABCA3-201ENST00000301732 RNF220Q5VTB9 566 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 IER5Q5VY09 327 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 FBXO39Q8N4B4 442 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 CENPIQ92674 756 aaPredicted RBP12.59□□□□□ -0.39
ABCA3-201ENST00000301732 L2HGDHQ9H9P8 463 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 ZNF180Q9UJW8 692 aa12.59□□□□□ -0.39
ABCA3-201ENST00000301732 DNMT1P26358 1616 aaKnown RBP12.59□□□□□ -0.39
ABCA3-201ENST00000301732 ASB14A6NK59 587 aa12.58□□□□□ -0.39
ABCA3-201ENST00000301732 CES2O00748 559 aa12.58□□□□□ -0.39
ABCA3-201ENST00000301732 SRSF11Q05519 484 aaKnown RBP12.58□□□□□ -0.39
ABCA3-201ENST00000301732 MTX3Q5HYI7 312 aa12.58□□□□□ -0.39
ABCA3-201ENST00000301732 SPESP1Q6UW49 350 aa12.58□□□□□ -0.39
ABCA3-201ENST00000301732 PNPT1Q8TCS8 783 aaKnown RBP12.58□□□□□ -0.39
ABCA3-201ENST00000301732 REXO5Q96IC2 774 aaKnown RBP12.58□□□□□ -0.39
ABCA3-201ENST00000301732 CCDC3Q9BQI4 270 aa12.58□□□□□ -0.39
ABCA3-201ENST00000301732 CRISPLD1Q9H336 500 aa12.58□□□□□ -0.39
ABCA3-201ENST00000301732 CMTM6Q9NX76 183 aa12.58□□□□□ -0.39
ABCA3-201ENST00000301732 VTI1BQ9UEU0 232 aa12.58□□□□□ -0.39
ABCA3-201ENST00000301732 ZNF112Q9UJU3 913 aa12.58□□□□□ -0.39
ABCA3-201ENST00000301732 TIMM44O43615 452 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 LCA5LO95447 670 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 ARF4P18085 180 aaPredicted RBP12.58□□□□□ -0.4
ABCA3-201ENST00000301732 ACADSBP45954 432 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 TTLL9Q3SXZ7 439 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 TPGS1Q6ZTW0 290 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 HGH1Q9BTY7 390 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 BTBD3Q9Y2F9 522 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 MYL4P12829 197 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 RBL1P28749 1068 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 CCR3P51677 355 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 USP46P62068 366 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 TRMT5Q32P41 509 aaKnown RBP12.58□□□□□ -0.4
ABCA3-201ENST00000301732 ZNF366Q8N895 744 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 ATP6V0D2Q8N8Y2 350 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 KAT5Q92993 513 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 ATG10Q9H0Y0 220 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 BAZ2BQ9UIF8 2168 aaKnown RBP12.58□□□□□ -0.4
ABCA3-201ENST00000301732 KHDRBS3O75525 346 aaKnown RBP12.58□□□□□ -0.4
ABCA3-201ENST00000301732 GRK4P32298 578 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 CHKAP35790 457 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 PDK3Q15120 406 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 GSTA3Q16772 222 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 UBE2OQ9C0C9 1292 aaKnown RBP12.58□□□□□ -0.4
ABCA3-201ENST00000301732 ALG2Q9H553 416 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 ZNF70Q9UC06 446 aaPredicted RBP12.58□□□□□ -0.4
ABCA3-201ENST00000301732 KLQ9UEF7 1012 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 F8VP50 259 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 KRT6AP02538 564 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 RHOCP08134 193 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 TTI2Q6NXR4 508 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 NOTUMQ6P988 496 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 POMZP3Q6PJE2 187 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 MTSS1LQ765P7 747 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 TMC7Q7Z402 723 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 GIPC3Q8TF64 312 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 FDXACB1Q9BRP7 624 aaPredicted RBP12.58□□□□□ -0.4
ABCA3-201ENST00000301732 BDH2Q9BUT1 245 aa12.58□□□□□ -0.4
ABCA3-201ENST00000301732 AAR2Q9Y312 384 aaKnown RBP12.58□□□□□ -0.4
ABCA3-201ENST00000301732 FKBP6O75344 327 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 CAMTA2O94983 1202 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 GTF2E2P29084 291 aaKnown RBP12.57□□□□□ -0.4
ABCA3-201ENST00000301732 SEMA5AQ13591 1074 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 PTPAQ15257 358 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 TSNQ15631 228 aaKnown RBP12.57□□□□□ -0.4
ABCA3-201ENST00000301732 QPCTQ16769 361 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 PAPD7Q5XG87 772 aaKnown RBP12.57□□□□□ -0.4
ABCA3-201ENST00000301732 ZDHHC13Q8IUH4 622 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 CLIP4Q8N3C7 705 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 ZNF540Q8NDQ6 660 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 WDR41Q9HAD4 459 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 ZNHIT2Q9UHR6 403 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 CPA4Q9UI42 421 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 SEC24AO95486 1093 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 CASP5P51878 434 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 DLG4P78352 724 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 EXOC3L1Q86VI1 746 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 FAM20CQ8IXL6 584 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 KIAA0895Q8NCT3 520 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 ATAD3AQ9NVI7 634 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 A0A087X0B3 334 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 IL18RAPO95256 599 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 HNRNPLP14866 589 aaKnown RBP eCLIP12.57□□□□□ -0.4
ABCA3-201ENST00000301732 ME2P23368 584 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 PCSK1P29120 753 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 AQP1P29972 269 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 ALDH4A1P30038 563 aa12.57□□□□□ -0.4
ABCA3-201ENST00000301732 ALDH7A1P49419 539 aaKnown RBP12.57□□□□□ -0.4
ABCA3-201ENST00000301732 MYBPC2Q14324 1141 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms