RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 DCTN4Q9UJW0 460 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 NUMBLQ9Y6R0 609 aa22.51■■□□□ 1.19
TPM4-201ENST00000300933 ZNF487B1APH4 448 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 NVLO15381 856 aaKnown RBP22.5■■□□□ 1.19
TPM4-201ENST00000300933 ODC1P11926 461 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 ACADSP16219 412 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 PCSK1P29120 753 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 RASSF2P50749 326 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 RASA2Q15283 850 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 RAB41Q5JT25 222 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 OTOAQ7RTW8 1153 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 PGBD4Q96DM1 585 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 APOL2Q9BQE5 337 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 MECRQ9BV79 373 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 UBP1Q9NZI7 540 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 FBXW11Q9UKB1 542 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 DCLK1O15075 740 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 EDF1O60869 148 aaKnown RBP22.5■■□□□ 1.19
TPM4-201ENST00000300933 SEMA5AQ13591 1074 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 CCSAPQ6IQ19 270 aaPredicted RBP22.5■■□□□ 1.19
TPM4-201ENST00000300933 ZNF276Q8N554 614 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 PHC3Q8NDX5 983 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 C10orf82Q8WW14 230 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 PPCSQ9HAB8 311 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 OR12D3Q9UGF7 316 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 FETUBQ9UGM5 382 aa22.5■■□□□ 1.19
TPM4-201ENST00000300933 RPL9P32969 192 aaKnown RBP22.49■■□□□ 1.19
TPM4-201ENST00000300933 GMPRP36959 345 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 MAGEA3P43357 314 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 MAGEA6P43360 314 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 POLE2P56282 527 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 WASHC2DQ5SRD0 308 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 OVOS1Q6IE37 1185 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 RTN4RL1Q86UN2 441 aaPredicted RBP22.49■■□□□ 1.19
TPM4-201ENST00000300933 TAC4Q86UU9 113 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 MCUQ8NE86 351 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 MIPEPQ99797 713 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 SFMBT1Q9UHJ3 866 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 SHROOM3Q8TF72 1996 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 ANKRD33BA6NCL7 494 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 MSI1O43347 362 aaKnown RBP22.49■■□□□ 1.19
TPM4-201ENST00000300933 RCN2Q14257 317 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 PRKD1Q15139 912 aaPredicted RBP22.49■■□□□ 1.19
TPM4-201ENST00000300933 KLHDC9Q8NEP7 349 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 DCLRE1BQ9H816 532 aa22.49■■□□□ 1.19
TPM4-201ENST00000300933 KLHL8Q9P2G9 620 aaPredicted RBP22.49■■□□□ 1.19
TPM4-201ENST00000300933 FBXO21O94952 628 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 ZWINTO95229 277 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 IRX4P78413 519 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 DSC3Q14574 896 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 RCN1Q15293 331 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 INTS6LQ5JSJ4 861 aaKnown RBP22.48■■□□□ 1.19
TPM4-201ENST00000300933 SH2D5Q6ZV89 423 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 NLRP9Q7RTR0 991 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 RSPH1Q8WYR4 309 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 E2F8A0AVK6 867 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 HMX2A2RU54 273 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 NUMBP49757 651 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 PDK1Q15118 436 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 RWDD4Q6NW29 188 aaKnown RBP22.48■■□□□ 1.19
TPM4-201ENST00000300933 METTL23Q86XA0 190 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 DTX3LQ8TDB6 740 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 OXNAD1Q96HP4 312 aaPredicted RBP22.48■■□□□ 1.19
TPM4-201ENST00000300933 ZNF333Q96JL9 665 aa22.48■■□□□ 1.19
TPM4-201ENST00000300933 PRG3Q9Y2Y8 225 aaPredicted RBP22.48■■□□□ 1.19
TPM4-201ENST00000300933 CCDC78A2IDD5 438 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 ZNF623O75123 536 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 DDHD2O94830 711 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 LRIG2O94898 1065 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 TPSB2P20231 275 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 PTPN4P29074 926 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 ROR2Q01974 943 aaKnown RBP22.47■■□□□ 1.19
TPM4-201ENST00000300933 LBRQ14739 615 aaKnown RBP22.47■■□□□ 1.19
TPM4-201ENST00000300933 TPSAB1Q15661 275 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 SNX30Q5VWJ9 437 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 USP33Q8TEY7 942 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 ASB3Q9Y575 518 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 MYCP01106 439 aaPredicted RBP22.47■■□□□ 1.19
TPM4-201ENST00000300933 BGNP21810 368 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 TUSC3Q13454 348 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 PLEKHG4Q58EX7 1191 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 TTC39BQ5VTQ0 682 aaPredicted RBP22.47■■□□□ 1.19
TPM4-201ENST00000300933 SCN4BQ8IWT1 228 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 OR52K1Q8NGK4 314 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 GSDMBQ8TAX9 411 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 GPR152Q8TDT2 470 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 SRPK1Q96SB4 655 aaKnown RBP22.47■■□□□ 1.19
TPM4-201ENST00000300933 ACBD6Q9BR61 282 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 PCMTD2Q9NV79 361 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 SYBUQ9NX95 663 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 PTCH2Q9Y6C5 1203 aa22.47■■□□□ 1.19
TPM4-201ENST00000300933 C2orf71A6NGG8 1288 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 KRT36O76013 467 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 PRKCHP24723 683 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 MBTPS1Q14703 1052 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 FAM171BQ6P995 826 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 C4orf50Q6ZRC1 276 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 NRG4Q8WWG1 115 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 SCG3Q8WXD2 468 aaKnown RBP22.46■■□□□ 1.19
TPM4-201ENST00000300933 B3GALT6Q96L58 329 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms