RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 FCRL3Q96P31 734 aaPredicted RBP14.93□□□□□ -0.02
SMG8-201ENST00000300917 KDM4CQ9H3R0 1056 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 SHROOM3Q8TF72 1996 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 TTC24A2A3L6 582 aaPredicted RBP14.93□□□□□ -0.02
SMG8-201ENST00000300917 GARSP41250 739 aaKnown RBP14.93□□□□□ -0.02
SMG8-201ENST00000300917 MAGEA3P43357 314 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 GLUD2P49448 558 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 PDE1BQ01064 536 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 VARS2Q5ST30 1063 aaKnown RBP14.93□□□□□ -0.02
SMG8-201ENST00000300917 RASSF3Q86WH2 238 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 PNPLA1Q8N8W4 532 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 NTAN1Q96AB6 310 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 TMEM237Q96Q45 408 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 AGAP2Q99490 1192 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 PKMYT1Q99640 499 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 RGS18Q9NS28 235 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 C2CD2LO14523 706 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 SPAG6O75602 509 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 RFPL1O75677 317 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 F9P00740 461 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 CYP11A1P05108 521 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 MGAT5BQ3V5L5 792 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 PLEKHG4Q58EX7 1191 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 PM20D1Q6GTS8 502 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 DEFB128Q7Z7B8 93 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 CMC1Q7Z7K0 106 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 TMEM173Q86WV6 379 aaPredicted RBP14.93□□□□□ -0.02
SMG8-201ENST00000300917 ANKLE1Q8NAG6 615 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 IPMKQ8NFU5 416 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 GIPC2Q8TF65 315 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 GORASP1Q9BQQ3 440 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 PPP1R12CQ9BZL4 782 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 PHACTR1Q9C0D0 580 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 MYLK2Q9H1R3 596 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 HMX1Q9NP08 348 aaPredicted RBP14.93□□□□□ -0.02
SMG8-201ENST00000300917 ACSS2Q9NR19 701 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 CHRAC1Q9NRG0 131 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 GMIPQ9P107 970 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 ZFATQ9P243 1243 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 TXNDC16Q9P2K2 825 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 DSEQ9UL01 958 aa14.93□□□□□ -0.02
SMG8-201ENST00000300917 TET1Q8NFU7 2136 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 KRT38O76015 456 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 PRKCHP24723 683 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 TARSP26639 723 aaKnown RBP14.92□□□□□ -0.02
SMG8-201ENST00000300917 MAGEA6P43360 314 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 TUBP50607 506 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 TRAF7Q6Q0C0 670 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 C4orf50Q6ZRC1 276 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 CIR1Q86X95 450 aaPredicted RBP14.92□□□□□ -0.02
SMG8-201ENST00000300917 PSTKQ8IV42 348 aaKnown RBP14.92□□□□□ -0.02
SMG8-201ENST00000300917 SLC9A7Q96T83 725 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 MLPHQ9BV36 600 aaPredicted RBP14.92□□□□□ -0.02
SMG8-201ENST00000300917 PPCSQ9HAB8 311 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 ZNF358Q9NW07 568 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 IRAK2O43187 625 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 NBNO60934 754 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 PMPCBO75439 489 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 NEBLO76041 1014 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 RPL17P18621 184 aaKnown RBP14.92□□□□□ -0.02
SMG8-201ENST00000300917 CST5P28325 142 aaPredicted RBP14.92□□□□□ -0.02
SMG8-201ENST00000300917 SERPINB4P48594 390 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 PCSK7Q16549 785 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 HSP90AA5PQ58FG0 334 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 LHX8Q68G74 356 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 FAM117BQ6P1L5 589 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 LRRC8BQ6P9F7 803 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 COLGALT2Q8IYK4 626 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 ZNF419Q96HQ0 510 aaPredicted RBP14.92□□□□□ -0.02
SMG8-201ENST00000300917 TSSK1BQ9BXA7 367 aa14.92□□□□□ -0.02
SMG8-201ENST00000300917 SCAMP3O14828 347 aaKnown RBP14.91□□□□□ -0.02
SMG8-201ENST00000300917 HOXD10P28358 340 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 HNRNPH1P31943 449 aaKnown RBP14.91□□□□□ -0.02
SMG8-201ENST00000300917 LGSNQ5TDP6 509 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 LRRC8DQ7L1W4 858 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 CNTD1Q8N815 330 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 FRMD8Q9BZ67 464 aaPredicted RBP14.91□□□□□ -0.02
SMG8-201ENST00000300917 VPS11Q9H270 941 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 ACTR5Q9H9F9 607 aaPredicted RBP14.91□□□□□ -0.02
SMG8-201ENST00000300917 CAB39LQ9H9S4 337 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 BPTFQ12830 3046 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 FAM159BA6NKW6 160 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 TPP1O14773 563 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 CSPG5O95196 566 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 TMPRSS15P98073 1019 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 PSMD5Q16401 504 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 TMCO2Q7Z6W1 182 aaPredicted RBP14.91□□□□□ -0.02
SMG8-201ENST00000300917 UNKQ9C0B0 810 aaKnown RBP14.91□□□□□ -0.02
SMG8-201ENST00000300917 SLC39A8Q9C0K1 460 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 PRKAG3Q9UGI9 489 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 CHKBQ9Y259 395 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 CBX6O95503 412 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 CCR1P32246 355 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 MAXP61244 160 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 PPIDQ08752 370 aaKnown RBP14.91□□□□□ -0.02
SMG8-201ENST00000300917 ITKQ08881 620 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 SCAPQ12770 1279 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 POU6F1Q14863 301 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 DLG2Q15700 870 aa14.91□□□□□ -0.02
SMG8-201ENST00000300917 TCTN1Q2MV58 587 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms