RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 GNA12Q03113 381 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 CDK18Q07002 472 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 PTK2BQ14289 1009 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 PIGGQ5H8A4 983 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 LDLRAP1Q5SW96 308 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 EGFLAMQ63HQ2 1017 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 CHERPQ8IWX8 916 aaKnown RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 PLD5Q8N7P1 536 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 ZMAT2Q96NC0 199 aaKnown RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 HEPHQ9BQS7 1158 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 ADPGKQ9BRR6 497 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 SFMBT1Q9UHJ3 866 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 BCAP29Q9UHQ4 241 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 CDY2AQ9Y6F7 541 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 CDY1Q9Y6F8 540 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 C1orf232A0A0U1RR37 186 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 PRPSAP2O60256 369 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 BBOX1O75936 387 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 LDHAP00338 332 aaKnown RBP11.23□□□□□ -0.61
SNX20-201ENST00000300590 PDGFRAP16234 1089 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 HDCP19113 662 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 MX2P20592 715 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 HMOX2P30519 316 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 PFKPQ01813 784 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 TAP1Q03518 808 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 TRAF2Q12933 501 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 NME3Q13232 169 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 NEDD8Q15843 81 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 PDCD4Q53EL6 469 aaKnown RBP11.23□□□□□ -0.61
SNX20-201ENST00000300590 NANOGP8Q6NSW7 305 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 EPGNQ6UW88 154 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 HHIPL2Q6UWX4 724 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 TMEM26Q6ZUK4 368 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 PQLC3Q8N755 202 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 TMEM102Q8N9M5 508 aaPredicted RBP11.23□□□□□ -0.61
SNX20-201ENST00000300590 CMASQ8NFW8 434 aaPredicted RBP11.23□□□□□ -0.61
SNX20-201ENST00000300590 MASTLQ96GX5 879 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 VPS50Q96JG6 964 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 APBA2Q99767 749 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 ACO2Q99798 780 aaKnown RBP11.23□□□□□ -0.61
SNX20-201ENST00000300590 RAVER2Q9HCJ3 691 aaKnown RBP11.23□□□□□ -0.61
SNX20-201ENST00000300590 CYP26B1Q9NR63 512 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 DCDC2Q9UHG0 476 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 CLRN2A0PK11 232 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 DYTNA2CJ06 578 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 FAM149AA5PLN7 773 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 AKAP10O43572 662 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 MYL4P12829 197 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 CCDC130P13994 396 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 MGAT1P26572 445 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 BCAP31P51572 246 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 IRF9Q00978 393 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 OLIG2Q13516 323 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 TFDP2Q14188 446 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 CYP2A13Q16696 494 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 PITRM1Q5JRX3 1037 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 OR6B2Q6IFH4 312 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 DCDC5Q6ZRR9 648 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNX20-201ENST00000300590 DEPTORQ8TB45 409 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 FAM110BQ8TC76 370 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 RSPH1Q8WYR4 309 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 CDKL2Q92772 493 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 SDCBP2Q9H190 292 aa11.23□□□□□ -0.61
SNX20-201ENST00000300590 STN1Q9H668 368 aaKnown RBP11.23□□□□□ -0.61
SNX20-201ENST00000300590 DHX33Q9H6R0 707 aaKnown RBP11.23□□□□□ -0.61
SNX20-201ENST00000300590 SCAF8Q9UPN6 1271 aaKnown RBP11.23□□□□□ -0.61
SNX20-201ENST00000300590 TMA7Q9Y2S6 64 aaKnown RBP11.23□□□□□ -0.61
SNX20-201ENST00000300590 PRSS51A0A1B0GVH4 220 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 VAPBO95292 243 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 JUNP05412 331 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 ARSAP15289 507 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 EPHX2P34913 555 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 DGKZQ13574 1117 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 Q3C1V9 767 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 SLC27A3Q5K4L6 730 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 SAPCD2Q86UD0 394 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 FIBCD1Q8N539 461 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 LZTR1Q8N653 840 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 SAMD3Q8N6K7 520 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 TMEM174Q8WUU8 243 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 CASP10Q92851 521 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 DCPSQ96C86 337 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 SLC2A11Q9BYW1 496 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 CXorf21Q9HAI6 301 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 CLK4Q9HAZ1 481 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 SEPT10Q9P0V9 454 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 PRPF19Q9UMS4 504 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 PCDHA11Q9Y5I1 949 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 CNTNAP4Q9C0A0 1308 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 GOLGA8TH3BQL2 631 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 MATN2O00339 956 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 NRP1O14786 923 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 FAM189A1O60320 539 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 CDH3P22223 829 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 YAP1P46937 504 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 ALDH3B2P48448 385 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms