RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 DENND1CQ8IV53 801 aa8.5□□□□□ -1.05
SNRPD1-201ENST00000300413 RASGEF1CQ8N431 466 aa8.5□□□□□ -1.05
SNRPD1-201ENST00000300413 SH3KBP1Q96B97 665 aa8.5□□□□□ -1.05
SNRPD1-201ENST00000300413 FIZ1Q96SL8 496 aa8.5□□□□□ -1.05
SNRPD1-201ENST00000300413 MAGEH1Q9H213 219 aa8.5□□□□□ -1.05
SNRPD1-201ENST00000300413 HSD3B7Q9H2F3 369 aa8.5□□□□□ -1.05
SNRPD1-201ENST00000300413 DCDC2Q9UHG0 476 aa8.5□□□□□ -1.05
SNRPD1-201ENST00000300413 A0A1B0GVM2 712 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TCAF2A6NFQ2 919 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TSPAN3O60637 253 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TBL1XO60907 577 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 RHOBTB1O94844 696 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 ACRP10323 421 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 GFAPP14136 432 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 CDH5P33151 784 aaPredicted RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 NDST2P52849 883 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 RPL7AP62424 266 aaKnown RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 ZCCHC9Q8N567 271 aaKnown RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 ALLCQ8N6M5 410 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 FBXO36Q8NEA4 188 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 ELMO3Q96BJ8 720 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 IGSF21Q96ID5 467 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 CELF6Q96J87 481 aaKnown RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 SPATA16Q9BXB7 569 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 ACP6Q9NPH0 428 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TLR9Q9NR96 1032 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 KCTD5Q9NXV2 234 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TMEM189-UBE2V1I3L0A0 370 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 HGSO14964 777 aaPredicted RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 PAGE1O75459 146 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 AARSP49588 968 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 PRKAA2P54646 552 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 NAA20P61599 178 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TRMT11Q7Z4G4 463 aaKnown RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 PPP1R10Q96QC0 940 aaKnown RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 HERC2P3Q9BVR0 1158 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 B3GNT5Q9BYG0 378 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 SCML2Q9UQR0 700 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 YIPF1Q9Y548 306 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 MYADML2A6NDP7 307 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 SYCE1LA8MT33 242 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 HNRNPA1P09651 372 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 PFKLP17858 780 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 HLA-DPA1P20036 260 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 DPYSL3Q14195 570 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TCEAL1Q15170 157 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 IMPG1Q17R60 797 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 KDELC2Q7Z4H8 507 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TMEM139Q8IV31 216 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 GSPT2Q8IYD1 628 aaKnown RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 SPDYE1Q8NFV5 336 aaPredicted RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 ZNF461Q8TAF7 563 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TFAP2BQ92481 460 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 FAM118BQ9BPY3 351 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 RNF39Q9H2S5 420 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 VCX3BQ9H321 246 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 LATS2Q9NRM7 1088 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 SMARCAL1Q9NZC9 954 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 DOLKQ9UPQ8 538 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 NAALADL1Q9UQQ1 740 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 MRPS17Q9Y2R5 130 aaKnown RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TBC1D3BA6NDS4 549 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 ZW10O43264 779 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 CHRNA1P02708 482 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 ASLP04424 464 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 RBP1P09455 135 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 ZNF7P17097 686 aaPredicted RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 HCAR3P49019 387 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 UPP1Q16831 310 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TMEM192Q8IY95 271 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 SERPINI1Q99574 410 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 BBS2Q9BXC9 721 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 LMAN2LQ9H0V9 348 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 FBXL21Q9UKT6 434 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 TLR6Q9Y2C9 796 aa8.49□□□□□ -1.05
SNRPD1-201ENST00000300413 C9IYK1 514 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 CCDC22O60826 627 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 GALTP07902 379 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 MYL2P10916 166 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 CCNB1P14635 433 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 CHRNB2P17787 502 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 TACR2P21452 398 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 SERPINH1P50454 418 aaKnown RBP8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 TRIM32Q13049 653 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 PEX6Q13608 980 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 NOMO1Q15155 1222 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 PCID2Q5JVF3 399 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 ANKRD20A2Q5SQ80 823 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 GRTP1Q5TC63 336 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 ANKRD20A1Q5TYW2 823 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 C15orf39Q6ZRI6 1047 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 CLEC20AQ6ZU45 233 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 SMG8Q8ND04 991 aaKnown RBP8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 JOSD2Q8TAC2 188 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 HEXDCQ8WVB3 486 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 EXT2Q93063 718 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 FAR2Q96K12 515 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 PANX3Q96QZ0 392 aa8.48□□□□□ -1.05
SNRPD1-201ENST00000300413 WWP1Q9H0M0 922 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms