RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 LRGUKQ96M69 825 aa19.63■□□□□ 0.73
TRA2A-201ENST00000297071 CSPG4P5Q96PW8 444 aa19.63■□□□□ 0.73
TRA2A-201ENST00000297071 TRIM56Q9BRZ2 755 aaKnown RBP19.63■□□□□ 0.73
TRA2A-201ENST00000297071 DTLQ9NZJ0 730 aa19.63■□□□□ 0.73
TRA2A-201ENST00000297071 IGSF9Q9P2J2 1179 aa19.63■□□□□ 0.73
TRA2A-201ENST00000297071 VTI1BQ9UEU0 232 aa19.63■□□□□ 0.73
TRA2A-201ENST00000297071 LZTS1Q9Y250 596 aa19.63■□□□□ 0.73
TRA2A-201ENST00000297071 USP3Q9Y6I4 520 aa19.63■□□□□ 0.73
TRA2A-201ENST00000297071 TANC1Q9C0D5 1861 aa19.63■□□□□ 0.73
TRA2A-201ENST00000297071 PRSS51A0A1B0GVH4 220 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 CAPN8A6NHC0 703 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 CRTAMO95727 393 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 HSPA4LO95757 839 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 PIK3R1P27986 724 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 LIMK2P53671 638 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 CSE1LP55060 971 aaKnown RBP19.62■□□□□ 0.73
TRA2A-201ENST00000297071 ORC1Q13415 861 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 TTLL12Q14166 644 aaPredicted RBP19.62■□□□□ 0.73
TRA2A-201ENST00000297071 TCHHL1Q5QJ38 904 aaPredicted RBP19.62■□□□□ 0.73
TRA2A-201ENST00000297071 NCBP2-AS2Q69YL0 99 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 BNC2Q6ZN30 1099 aaPredicted RBP19.62■□□□□ 0.73
TRA2A-201ENST00000297071 SLC26A9Q7LBE3 791 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 STRADAQ7RTN6 431 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 TRPC4APQ8TEL6 797 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 CCDC124Q96CT7 223 aaKnown RBP19.62■□□□□ 0.73
TRA2A-201ENST00000297071 CERS2Q96G23 380 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 GCNAQ96QF7 691 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 CAMKK2Q96RR4 588 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 SLC2A11Q9BYW1 496 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 TCF7L2Q9NQB0 619 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 SNX15Q9NRS6 342 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 AFG3L2Q9Y4W6 797 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 GOLGA8QA0A0J9YX86 632 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 GOLGA8OA6NCC3 632 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 GOLGA8NF8WBI6 632 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 G3V2L1 256 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 TADA2AO75478 443 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 STAG3L1P0CL83 205 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 NR1H2P55055 460 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 GOLGA7BQ2TAP0 167 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 ARHGAP17Q68EM7 881 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 UNC5BQ8IZJ1 945 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 COLGALT1Q8NBJ5 622 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 CLMNQ96JQ2 1002 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 ILKAPQ9H0C8 392 aaPredicted RBP19.62■□□□□ 0.73
TRA2A-201ENST00000297071 GGA3Q9NZ52 723 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 CLIC5Q9NZA1 410 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 AP4E1Q9UPM8 1137 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 RAP2CQ9Y3L5 183 aa19.62■□□□□ 0.73
TRA2A-201ENST00000297071 TNS1Q9HBL0 1735 aaKnown RBP19.61■□□□□ 0.73
TRA2A-201ENST00000297071 MATN2O00339 956 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 SORBS2O94875 1100 aaKnown RBP19.61■□□□□ 0.73
TRA2A-201ENST00000297071 MGAT1P26572 445 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 PSMD8P48556 350 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 ERFP50548 548 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 CXCL9Q07325 125 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 IRAK1BP1Q5VVH5 260 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 RBM44Q6ZP01 1051 aaKnown RBP19.61■□□□□ 0.73
TRA2A-201ENST00000297071 CNTD1Q8N815 330 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 TOP1MTQ969P6 601 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 LENG8Q96PV6 779 aaPredicted RBP19.61■□□□□ 0.73
TRA2A-201ENST00000297071 MRPL40Q9NQ50 206 aaKnown RBP19.61■□□□□ 0.73
TRA2A-201ENST00000297071 PICK1Q9NRD5 415 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 ANKRD6Q9Y2G4 727 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 AP4B1Q9Y6B7 739 aa19.61■□□□□ 0.73
TRA2A-201ENST00000297071 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.6■□□□□ 0.73
TRA2A-201ENST00000297071 SPDYE16A6NNV3 312 aaPredicted RBP19.6■□□□□ 0.73
TRA2A-201ENST00000297071 INO80B-WBP1J3KQ70 363 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 HDAC3O15379 428 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 PAPSS1O43252 624 aaPredicted RBP19.6■□□□□ 0.73
TRA2A-201ENST00000297071 BCAS2O75934 225 aaPredicted RBP19.6■□□□□ 0.73
TRA2A-201ENST00000297071 FAM58BPP0C7Q3 252 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 ETS2P15036 469 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 CSRP3P50461 194 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 SLC9B1Q4ZJI4 515 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 PPP6R3Q5H9R7 873 aaPredicted RBP19.6■□□□□ 0.73
TRA2A-201ENST00000297071 PMF1Q6P1K2 205 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 CASC4Q6P4E1 433 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 KLHDC10Q6PID8 442 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 DSELQ8IZU8 1212 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 ZNF781Q8N8C0 355 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 KBTBD7Q8WVZ9 684 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 KCTD15Q96SI1 283 aaPredicted RBP19.6■□□□□ 0.73
TRA2A-201ENST00000297071 DRC3Q9H069 523 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 LRRC40Q9H9A6 602 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 ZNF277Q9NRM2 450 aaPredicted RBP19.6■□□□□ 0.73
TRA2A-201ENST00000297071 UBAP1Q9NZ09 502 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 RAD54BQ9Y620 910 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 LOC100653049A0A140TA62 436 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 TIMM44O43615 452 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 KRT34O76011 436 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 DPYSQ14117 519 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 PDCD11Q14690 1871 aaKnown RBP19.6■□□□□ 0.73
TRA2A-201ENST00000297071 ZNF638Q14966 1978 aaKnown RBP19.6■□□□□ 0.73
TRA2A-201ENST00000297071 TMEM132DQ14C87 1099 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 NADK2Q4G0N4 442 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 VWA5B1Q5TIE3 1220 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 TMEM192Q8IY95 271 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 DCLK2Q8N568 766 aa19.6■□□□□ 0.73
TRA2A-201ENST00000297071 TDRD5Q8NAT2 981 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms