RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CST9Q5W186 159 aa16.2■□□□□ 0.18
NCKIPSD-201ENST00000294129 KCTD13Q8WZ19 329 aa16.2■□□□□ 0.18
NCKIPSD-201ENST00000294129 RSRC1Q96IZ7 334 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-201ENST00000294129 TMEM209Q96SK2 561 aa16.2■□□□□ 0.18
NCKIPSD-201ENST00000294129 COLEC11Q9BWP8 271 aa16.2■□□□□ 0.18
NCKIPSD-201ENST00000294129 SAR1AQ9NR31 198 aa16.2■□□□□ 0.18
NCKIPSD-201ENST00000294129 GTF2IRD1Q9UHL9 959 aa16.2■□□□□ 0.18
NCKIPSD-201ENST00000294129 TGDSO95455 350 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 JCHAINP01591 159 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 OCRLQ01968 901 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 DLG2Q15700 870 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 TRIM68Q6AZZ1 485 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 KDELC2Q7Z4H8 507 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 TREML1Q86YW5 311 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 TRIM42Q8IWZ5 723 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 SCAMP5Q8TAC9 235 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 PTCD3Q96EY7 689 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 CERS2Q96G23 380 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 BTBD10Q9BSF8 475 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 EBF2Q9HAK2 575 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 VANGL2Q9ULK5 521 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 DFFAO00273 331 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 TOMM70O94826 608 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 CHRNA1P02708 482 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 NFKB1P19838 968 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 CD52P31358 61 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 THPOP40225 353 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 RGS2P41220 211 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 NIPAL4Q0D2K0 466 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 UBAP2LQ14157 1087 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 PAFAH1B3Q15102 231 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 TEX44Q53QW1 395 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 AGMOQ6ZNB7 445 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 MARK2Q7KZI7 788 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 ATP2A3Q93084 1043 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 SHCBP1LQ9BZQ2 653 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 SLC38A7Q9NVC3 462 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 FBXW11Q9UKB1 542 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 EMCNQ9ULC0 261 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 DNAJC16Q9Y2G8 782 aa16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 HBS1LQ9Y450 684 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-201ENST00000294129 LRIG2O94898 1065 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 PAX7P23759 505 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 LHX1P48742 406 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 MXRA7P84157 204 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 ARL13BQ3SXY8 428 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 TAF2Q6P1X5 1199 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 STRA8Q7Z7C7 330 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 RSPH3Q86UC2 560 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 C10orf107Q8IVU9 208 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 RNPEPL1Q9HAU8 725 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 TAS2R1Q9NYW7 299 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 TMEM216Q9P0N5 145 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 TRPV2Q9Y5S1 764 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 SCN4AP35499 1836 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 B2RBV5 119 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 MLNP12872 115 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 STEAP4Q687X5 459 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 TAC4Q86UU9 113 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 SMC1BQ8NDV3 1235 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 TRPV1Q8NER1 839 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 DTX3LQ8TDB6 740 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 MOCOSQ96EN8 888 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 CHRAC1Q9NRG0 131 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 TMLHEQ9NVH6 421 aa16.18■□□□□ 0.18
NCKIPSD-201ENST00000294129 GSC2O15499 205 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 KPNB1Q14974 876 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 KHDC1Q4VXA5 237 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 ARHGAP36Q6ZRI8 547 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 PDZD4Q76G19 769 aaPredicted RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 OTOP3Q7RTS5 596 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 PSTKQ8IV42 348 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 SMARCD1Q96GM5 515 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 C7orf26Q96N11 449 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 GORASP1Q9BQQ3 440 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 CNGB3Q9NQW8 809 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 BFARQ9NZS9 450 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 ARHGAP42A6NI28 874 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 MEI4A8MW99 385 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 KLF11O14901 512 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 KIF1CO43896 1103 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 SKAP2O75563 359 aaPredicted RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 ALDH1A2O94788 518 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 MOCS2O96007 188 aaPredicted RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 AKR1A1P14550 325 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 CALB2P22676 271 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 FKBP1BP68106 108 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 DCLK2Q8N568 766 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 ZNF570Q96NI8 536 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 KCNK4Q9NYG8 393 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 LNPEPQ9UIQ6 1025 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 MSI1O43347 362 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 FBXO21O94952 628 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 CD68P34810 354 aaPredicted RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 SLC1A6P48664 564 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 ITGA9Q13797 1035 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 PLD6Q8N2A8 252 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 SPATA22Q8NHS9 363 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 CLPTM1LQ96KA5 538 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms