RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 LRRC43Q8N309 656 aa12.35□□□□□ -0.43
CLPB-201ENST00000294053 TMEM176AQ96HP8 235 aa12.35□□□□□ -0.43
CLPB-201ENST00000294053 MARK4Q96L34 752 aa12.35□□□□□ -0.43
CLPB-201ENST00000294053 CCDC28BQ9BUN5 200 aa12.35□□□□□ -0.43
CLPB-201ENST00000294053 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
CLPB-201ENST00000294053 DMTF1Q9Y222 760 aa12.35□□□□□ -0.43
CLPB-201ENST00000294053 TSC22D4Q9Y3Q8 395 aa12.35□□□□□ -0.43
CLPB-201ENST00000294053 STX16-NPEPL1H3BU86 382 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 ATP9BO43861 1147 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 SAT1P21673 171 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 MTTPP55157 894 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 YWHAEP62258 255 aaKnown RBP12.34□□□□□ -0.43
CLPB-201ENST00000294053 CRADDP78560 199 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 MYBPC1Q00872 1141 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 PPIL2Q13356 520 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 SCYL2Q6P3W7 929 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 C16orf87Q6PH81 154 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 UNC5BQ8IZJ1 945 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 SLC35B2Q8TB61 432 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.34□□□□□ -0.43
CLPB-201ENST00000294053 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 SLC44A1Q8WWI5 657 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 THAP11Q96EK4 314 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 TMA16Q96EY4 203 aaKnown RBP12.34□□□□□ -0.43
CLPB-201ENST00000294053 ABHD8Q96I13 439 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 B3GNT5Q9BYG0 378 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 FAM49AQ9H0Q0 323 aaPredicted RBP12.34□□□□□ -0.43
CLPB-201ENST00000294053 GJD2Q9UKL4 321 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 BARX2Q9UMQ3 279 aaPredicted RBP12.34□□□□□ -0.43
CLPB-201ENST00000294053 GMEB1Q9Y692 573 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 MCF2LO15068 1137 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 ALOX15P16050 662 aaPredicted RBP12.34□□□□□ -0.43
CLPB-201ENST00000294053 TFE3P19532 575 aaPredicted RBP12.34□□□□□ -0.43
CLPB-201ENST00000294053 CPOXP36551 454 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 SLC5A3P53794 718 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 PPP2R5DQ14738 602 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 TRMT10BQ6PF06 316 aaKnown RBP12.34□□□□□ -0.43
CLPB-201ENST00000294053 CHSY1Q86X52 802 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 TSPAN14Q8NG11 270 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 MZB1Q8WU39 189 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 ZMAT2Q96NC0 199 aaKnown RBP12.34□□□□□ -0.43
CLPB-201ENST00000294053 C16orf70Q9BSU1 422 aa12.34□□□□□ -0.43
CLPB-201ENST00000294053 MYO18AQ92614 2054 aaKnown RBP12.34□□□□□ -0.43
CLPB-201ENST00000294053 GAS2O43903 313 aaKnown RBP12.33□□□□□ -0.43
CLPB-201ENST00000294053 VARSP26640 1264 aaKnown RBP12.33□□□□□ -0.43
CLPB-201ENST00000294053 RXRGP48443 463 aa12.33□□□□□ -0.43
CLPB-201ENST00000294053 SLC1A6P48664 564 aa12.33□□□□□ -0.43
CLPB-201ENST00000294053 TMED10P49755 219 aaKnown RBP12.33□□□□□ -0.43
CLPB-201ENST00000294053 HNRNPDQ14103 355 aaKnown RBP12.33□□□□□ -0.43
CLPB-201ENST00000294053 CCDC142Q17RM4 750 aa12.33□□□□□ -0.43
CLPB-201ENST00000294053 PIWIL2Q8TC59 973 aaKnown RBP12.33□□□□□ -0.43
CLPB-201ENST00000294053 ZNF518BQ9C0D4 1074 aa12.33□□□□□ -0.43
CLPB-201ENST00000294053 TSPAN16Q9UKR8 245 aa12.33□□□□□ -0.43
CLPB-201ENST00000294053 FIS1Q9Y3D6 152 aa12.33□□□□□ -0.43
CLPB-201ENST00000294053 TPD52L2O43399 206 aaKnown RBP12.33□□□□□ -0.44
CLPB-201ENST00000294053 PSMC3P17980 439 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 SOX11P35716 441 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 PHKA2P46019 1235 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 ATXN1P54253 815 aaKnown RBP12.33□□□□□ -0.44
CLPB-201ENST00000294053 MRPS5P82675 430 aaKnown RBP12.33□□□□□ -0.44
CLPB-201ENST00000294053 CDKL1Q00532 357 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 DPYSL3Q14195 570 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 MARCH8Q5T0T0 291 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 FAM183BPQ6ZVS7 135 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 CYP4V2Q6ZWL3 525 aaPredicted RBP12.33□□□□□ -0.44
CLPB-201ENST00000294053 MYO1HQ8N1T3 1032 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 NIPA2Q8N8Q9 360 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 NAT8LQ8N9F0 302 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 NETO2Q8NC67 525 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 C18orf25Q96B23 403 aaPredicted RBP12.33□□□□□ -0.44
CLPB-201ENST00000294053 CMTM5Q96DZ9 223 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 TRPV6Q9H1D0 765 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLPB-201ENST00000294053 SETD4Q9NVD3 440 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 PRMT7Q9NVM4 692 aaPredicted RBP12.33□□□□□ -0.44
CLPB-201ENST00000294053 ADA2Q9NZK5 511 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 RSL24D1Q9UHA3 163 aaKnown RBP12.33□□□□□ -0.44
CLPB-201ENST00000294053 USP18Q9UMW8 372 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 NR2E3Q9Y5X4 410 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 H3BRB1 525 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 TMX2-CTNND1H3BSU7 103 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 KCNN4O15554 427 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 TSPAN1O60635 241 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 KRT38O76015 456 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 KLHL2O95198 593 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 AMHP03971 560 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 ITGAXP20702 1163 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 OSBPP22059 807 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 ABCG1P45844 678 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 TMEM132DQ14C87 1099 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 PPM1LQ5SGD2 360 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 PRAMEF19Q5SWL8 479 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 LRRC38Q5VT99 294 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 OR6B2Q6IFH4 312 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 XKR5Q6UX68 686 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 ACOT1Q86TX2 421 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 TNS4Q8IZW8 715 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 FBXW8Q8N3Y1 598 aa12.33□□□□□ -0.44
CLPB-201ENST00000294053 BHLHE22Q8NFJ8 381 aaPredicted RBP12.33□□□□□ -0.44
CLPB-201ENST00000294053 KIF12Q96FN5 646 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms