RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 H0Y626 953 aa26.07■■□□□ 1.76
U2AF1-201ENST00000291552 FOXN3O00409 490 aaPredicted RBP26.07■■□□□ 1.76
U2AF1-201ENST00000291552 GLI1P08151 1106 aa26.07■■□□□ 1.76
U2AF1-201ENST00000291552 CSNK1EP49674 416 aaKnown RBP26.07■■□□□ 1.76
U2AF1-201ENST00000291552 NUMBP49757 651 aa26.07■■□□□ 1.76
U2AF1-201ENST00000291552 ST8SIA6P61647 398 aa26.07■■□□□ 1.76
U2AF1-201ENST00000291552 TTC31Q49AM3 519 aaPredicted RBP26.07■■□□□ 1.76
U2AF1-201ENST00000291552 ATP6V0D2Q8N8Y2 350 aa26.07■■□□□ 1.76
U2AF1-201ENST00000291552 GAREM1Q9H706 876 aa26.07■■□□□ 1.76
U2AF1-201ENST00000291552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.07■■□□□ 1.76
U2AF1-201ENST00000291552 DDIT4Q9NX09 232 aa26.07■■□□□ 1.76
U2AF1-201ENST00000291552 KIAA1522Q9P206 1035 aaPredicted RBP26.07■■□□□ 1.76
U2AF1-201ENST00000291552 PLXNB3Q9ULL4 1909 aa26.07■■□□□ 1.76
U2AF1-201ENST00000291552 SYNJ2BP-COX16A0A087WUM0 186 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 F5H5T6 163 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 HSF2BPO75031 334 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 CBFA2T3O75081 653 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 SRPRAP08240 638 aaKnown RBP26.06■■□□□ 1.76
U2AF1-201ENST00000291552 STK19P49842 368 aaPredicted RBP26.06■■□□□ 1.76
U2AF1-201ENST00000291552 IRAK1P51617 712 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 CDK17Q00537 523 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 HSP90AA4PQ58FG1 418 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 LAYNQ6UX15 382 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 SGK2Q9HBY8 427 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 TM9SF3Q9HD45 589 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 PLCB1Q9NQ66 1216 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 COX16Q9P0S2 106 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 DOCK4Q8N1I0 1966 aa26.06■■□□□ 1.76
U2AF1-201ENST00000291552 PKD1L2Q7Z442 2459 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 MID1O15344 667 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 DAB1O75553 588 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 IGHV4-34P06331 123 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 ECT2LQ008S8 904 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 CENPCQ03188 943 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 CST6Q15828 149 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 HLA-BQ31612 363 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 EFHC1Q5JVL4 640 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 SMYD5Q6GMV2 418 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 OR6B2Q6IFH4 312 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 CXorf57Q6NSI4 855 aaKnown RBP26.05■■□□□ 1.76
U2AF1-201ENST00000291552 C11orf57Q6ZUT1 292 aaPredicted RBP26.05■■□□□ 1.76
U2AF1-201ENST00000291552 USP30Q70CQ3 517 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 CCDC117Q8IWD4 279 aaPredicted RBP26.05■■□□□ 1.76
U2AF1-201ENST00000291552 FAM71AQ8IYT1 594 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 CCAR2Q8N163 923 aaKnown RBP26.05■■□□□ 1.76
U2AF1-201ENST00000291552 RPL10LQ96L21 214 aaKnown RBP26.05■■□□□ 1.76
U2AF1-201ENST00000291552 FAM129BQ96TA1 746 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 NDST4Q9H3R1 872 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 OSGEPQ9NPF4 335 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 NEUROG3Q9Y4Z2 214 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 DMXL2Q8TDJ6 3036 aa26.05■■□□□ 1.76
U2AF1-201ENST00000291552 C10orf142B7Z368 130 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 FSBPO95073 299 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 CER1O95813 267 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 ZNF883P0CG24 379 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 PDGFRAP16234 1089 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 MZF1P28698 734 aaPredicted RBP26.04■■□□□ 1.76
U2AF1-201ENST00000291552 GGCXP38435 758 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 MATKP42679 507 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 AFF3P51826 1226 aaKnown RBP26.04■■□□□ 1.76
U2AF1-201ENST00000291552 PTK2Q05397 1052 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 HNRNPDQ14103 355 aaKnown RBP26.04■■□□□ 1.76
U2AF1-201ENST00000291552 TRIP6Q15654 476 aaKnown RBP26.04■■□□□ 1.76
U2AF1-201ENST00000291552 TPD52L1Q16890 204 aaPredicted RBP26.04■■□□□ 1.76
U2AF1-201ENST00000291552 KIF19Q2TAC6 998 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 FBXL22Q6P050 247 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 SLC26A9Q7LBE3 791 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 OR52K2Q8NGK3 314 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 IGSF8Q969P0 613 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 PCOLCE2Q9UKZ9 415 aa26.04■■□□□ 1.76
U2AF1-201ENST00000291552 EDDM13A0A1B0GTR0 161 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 A0A1B0GVM2 712 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 A0A1W2PP55 124 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 TCAF2A6NFQ2 919 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 MOCS3O95396 460 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 VAV1P15498 845 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 CCR1P32246 355 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 KCNMA1Q12791 1236 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 VWA3BQ502W6 1294 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 KCNT1Q5JUK3 1230 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 RAB44Q7Z6P3 723 aaPredicted RBP26.03■■□□□ 1.76
U2AF1-201ENST00000291552 MMAAQ8IVH4 418 aaKnown RBP26.03■■□□□ 1.76
U2AF1-201ENST00000291552 CHCHD4Q8N4Q1 142 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 KDF1Q8NAX2 398 aaPredicted RBP26.03■■□□□ 1.76
U2AF1-201ENST00000291552 PTPRN2Q92932 1015 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 TUBGCP2Q9BSJ2 902 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 TM7SF3Q9NS93 570 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 FBXL12Q9NXK8 326 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 SCML1Q9UN30 329 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 SNX11Q9Y5W9 270 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 FHOD1Q9Y613 1164 aa26.03■■□□□ 1.76
U2AF1-201ENST00000291552 TARSL2A2RTX5 802 aaKnown RBP26.02■■□□□ 1.76
U2AF1-201ENST00000291552 SLC2A3P11169 496 aa26.02■■□□□ 1.76
U2AF1-201ENST00000291552 TFE3P19532 575 aaPredicted RBP26.02■■□□□ 1.76
U2AF1-201ENST00000291552 CD27P26842 260 aa26.02■■□□□ 1.76
U2AF1-201ENST00000291552 GRIA4P48058 902 aa26.02■■□□□ 1.76
U2AF1-201ENST00000291552 SLC6A3Q01959 620 aa26.02■■□□□ 1.76
U2AF1-201ENST00000291552 KIAA0895LQ68EN5 471 aa26.02■■□□□ 1.76
U2AF1-201ENST00000291552 STK40Q8N2I9 435 aa26.02■■□□□ 1.76
U2AF1-201ENST00000291552 AADATQ8N5Z0 425 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms