RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 ENDOD1O94919 500 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 SDC4P31431 198 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 PTPN9P43378 593 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 ZNF143P52747 638 aaPredicted RBP13.8□□□□□ -0.2
PSMB4-201ENST00000290541 HDAC4P56524 1084 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 DEUP1Q05D60 604 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 SPA17Q15506 151 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 PLK5Q496M5 336 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 C10orf76Q5T2E6 689 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 NADSYN1Q6IA69 706 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 DDX42Q86XP3 938 aaKnown RBP eCLIP13.8□□□□□ -0.25e-6■■■□□ 16.3
PSMB4-201ENST00000290541 LSM14AQ8ND56 463 aaKnown RBP13.8□□□□□ -0.2
PSMB4-201ENST00000290541 FAM172AQ8WUF8 416 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 DEPDC1BQ8WUY9 529 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 OSCP1Q8WVF1 389 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 CTNNBL1Q8WYA6 563 aaPredicted RBP13.8□□□□□ -0.2
PSMB4-201ENST00000290541 CENPIQ92674 756 aaPredicted RBP13.8□□□□□ -0.2
PSMB4-201ENST00000290541 PLD4Q96BZ4 506 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 FAM83CQ9BQN1 747 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 MAGEB5Q9BZ81 275 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 LACRTQ9GZZ8 138 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 HPS4Q9NQG7 708 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 DUS2Q9NX74 493 aaKnown RBP13.8□□□□□ -0.2
PSMB4-201ENST00000290541 CTTNBP2NLQ9P2B4 639 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 SALL4Q9UJQ4 1053 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 STAP1Q9ULZ2 295 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 TLR6Q9Y2C9 796 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 SNX10Q9Y5X0 201 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 SCINQ9Y6U3 715 aa13.8□□□□□ -0.2
PSMB4-201ENST00000290541 SPTAN1Q13813 2472 aaKnown RBP13.8□□□□□ -0.2
PSMB4-201ENST00000290541 COL6A6A6NMZ7 2263 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 CCDC163A0A0D9SF12 145 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 BCLAF3A2AJT9 711 aaKnown RBP13.79□□□□□ -0.2
PSMB4-201ENST00000290541 KCNU1A8MYU2 1149 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 TRDMT1O14717 391 aaKnown RBP13.79□□□□□ -0.2
PSMB4-201ENST00000290541 CHADO15335 359 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
PSMB4-201ENST00000290541 NTRK1P04629 796 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 PSMA2P25787 234 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 GBP1P32455 592 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 CXCR3P49682 368 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 NNTQ13423 1086 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 EML3Q32P44 896 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 FAM131BQ86XD5 332 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 YAF2Q8IY57 180 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 SLC35G2Q8TBE7 412 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 ZNF564Q8TBZ8 553 aaPredicted RBP13.79□□□□□ -0.2
PSMB4-201ENST00000290541 MYEOVQ96EZ4 313 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 PGAP3Q96FM1 320 aaPredicted RBP13.79□□□□□ -0.2
PSMB4-201ENST00000290541 PPP1R9BQ96SB3 815 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 CNPY3Q9BT09 278 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 DUSP15Q9H1R2 295 aaPredicted RBP13.79□□□□□ -0.2
PSMB4-201ENST00000290541 EBF3Q9H4W6 596 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 MRPL47Q9HD33 250 aaKnown RBP13.79□□□□□ -0.2
PSMB4-201ENST00000290541 RRN3Q9NYV6 651 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 ANAPC7Q9UJX3 599 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 INTUQ9ULD6 942 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 DUSP10Q9Y6W6 482 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 PIAS3Q9Y6X2 628 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 PTPRBP23467 1997 aa13.79□□□□□ -0.2
PSMB4-201ENST00000290541 NBPF19A0A087WUL8 3843 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 A0A087WV48 116 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 PTMAP06454 111 aaKnown RBP13.78□□□□□ -0.2
PSMB4-201ENST00000290541 TCF4P15884 667 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 SLC6A4P31645 630 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 RDXP35241 583 aaKnown RBP13.78□□□□□ -0.2
PSMB4-201ENST00000290541 GGCXP38435 758 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 IFNAR2P48551 515 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 PXNP49023 591 aaPredicted RBP13.78□□□□□ -0.2
PSMB4-201ENST00000290541 KPNA1P52294 538 aaPredicted RBP13.78□□□□□ -0.2
PSMB4-201ENST00000290541 CREB5Q02930 508 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 UAP1L1Q3KQV9 507 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 ARHGAP29Q52LW3 1261 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 CC2D1AQ6P1N0 951 aaPredicted RBP13.78□□□□□ -0.2
PSMB4-201ENST00000290541 PIP4P1Q86T03 277 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 ADGRG2Q8IZP9 1017 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 CCDC185Q8N715 623 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 CCDC112Q8NEF3 446 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 RNF34Q969K3 372 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 SLC32A1Q9H598 525 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 BRD9Q9H8M2 597 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 TRPV5Q9NQA5 729 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 THG1LQ9NWX6 298 aaKnown RBP13.78□□□□□ -0.2
PSMB4-201ENST00000290541 ARHGEF38Q9NXL2 777 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 GTSE1Q9NYZ3 720 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 TRIM10Q9UDY6 481 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 LSM7Q9UK45 103 aaKnown RBP13.78□□□□□ -0.2
PSMB4-201ENST00000290541 ADGRG1Q9Y653 693 aa13.78□□□□□ -0.2
PSMB4-201ENST00000290541 ACSL4O60488 711 aa13.77□□□□□ -0.21
PSMB4-201ENST00000290541 TSPAN3O60637 253 aa13.77□□□□□ -0.21
PSMB4-201ENST00000290541 CCR1P32246 355 aa13.77□□□□□ -0.21
PSMB4-201ENST00000290541 SOX9P48436 509 aa13.77□□□□□ -0.21
PSMB4-201ENST00000290541 HARS2P49590 506 aaKnown RBP13.77□□□□□ -0.21
PSMB4-201ENST00000290541 SGSHP51688 502 aa13.77□□□□□ -0.21
PSMB4-201ENST00000290541 VAV2P52735 878 aa13.77□□□□□ -0.21
PSMB4-201ENST00000290541 CCDC173Q0VFZ6 552 aa13.77□□□□□ -0.21
PSMB4-201ENST00000290541 LRRC32Q14392 662 aa13.77□□□□□ -0.21
PSMB4-201ENST00000290541 FAM133BQ5BKY9 247 aaKnown RBP13.77□□□□□ -0.21
PSMB4-201ENST00000290541 DOPEY1Q5JWR5 2465 aa13.77□□□□□ -0.21
PSMB4-201ENST00000290541 ARTNQ5T4W7 220 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms