RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SCNN1BP51168 640 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 PURAQ00577 322 aaKnown RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 BST2Q10589 180 aaKnown RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 LBRQ14739 615 aaKnown RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 KCTD19Q17RG1 926 aaPredicted RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 RGS21Q2M5E4 152 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 SMTNL2Q2TAL5 461 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 LIN52Q52LA3 116 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF618Q5T7W0 954 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 PDPK2PQ6A1A2 396 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 ARHGAP39Q9C0H5 1083 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 CDT1Q9H211 546 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 SLCO1B3Q9NPD5 702 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 BLOC1S4Q9NUP1 217 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF180Q9UJW8 692 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF536O15090 1300 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 RGS5O15539 181 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 CCDC130P13994 396 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 SYN1P17600 705 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 CDH18Q13634 790 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 PSMD5Q16401 504 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 EXOC3L1Q86VI1 746 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 MS4A4AQ96JQ5 239 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF518BQ9C0D4 1074 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 INSL6Q9Y581 213 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 MYH3P11055 1940 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 SNX2O60749 519 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 KRR1Q13601 381 aaKnown RBP11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 C2CD6Q53TS8 623 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 DCAF6Q58WW2 860 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 FAXCQ5TGI0 409 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 ASIC4Q96FT7 647 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 FSD1LQ9BXM9 530 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 AK5Q9Y6K8 562 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 VIRMAQ69YN4 1812 aaKnown RBP11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 A0A087WXM4 84 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 OR6C75A6NL08 312 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 RARAP10276 462 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 NR1H2P55055 460 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 PIGHQ14442 188 aaPredicted RBP11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 FRA10AC1Q70Z53 315 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 KBTBD2Q8IY47 623 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF557Q8N988 423 aaPredicted RBP11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 KYQ8NBH2 561 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 TMEM161BQ8NDZ6 487 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 TNIP2Q8NFZ5 429 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 OR6P1Q8NGX9 317 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 COPS7BQ9H9Q2 264 aaPredicted RBP11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 ASAH2Q9NR71 780 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 COPG2Q9UBF2 871 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 RPL26L1Q9UNX3 145 aaKnown RBP11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 ANKRD36CQ5JPF3 1778 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 SLX4Q8IY92 1834 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 SLC9A3R1O14745 358 aaPredicted RBP11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 MMP13P45452 471 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 CASP4P49662 377 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 AASDHQ4L235 1098 aaPredicted RBP11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 SLC39A12Q504Y0 691 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 TMEM63BQ5T3F8 832 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 ZBTB46Q86UZ6 589 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 PALB2Q86YC2 1186 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 SIAH1Q8IUQ4 282 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 P3H2Q8IVL5 708 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 UNC45BQ8IWX7 931 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 LPPQ93052 612 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 TRIM63Q969Q1 353 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 MRGBPQ9NV56 204 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 MOSPD1Q9UJG1 213 aa11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 TIMM13Q9Y5L4 95 aaPredicted RBP11.62□□□□□ -0.55
NPC1L1-201ENST00000289547 F5H5T6 163 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 RNASEH1O60930 286 aaKnown RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 SNAI1O95863 264 aaPredicted RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 YWHAQP27348 245 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 HADHAP40939 763 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 RIPOR1Q6ZS17 1223 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 BNIPLQ7Z465 357 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 PDCD6IPQ8WUM4 868 aaKnown RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 RNF225M0QZC1 329 aaPredicted RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 CLOCKO15516 846 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 GLRA3O75311 464 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 NUDT17P0C025 328 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 ACRP10323 421 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 MRPS22P82650 360 aaKnown RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 SLC26A11Q86WA9 606 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 MAB21L3Q8N8X9 362 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 DBF4BQ8NFT6 615 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 MAGEB5Q9BZ81 275 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 MYH2Q9UKX2 1941 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 IGLV3-22A0A075B6J6 115 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 PHGDHO43175 533 aaKnown RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 GPD1P21695 349 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 RPA3P35244 121 aaPredicted RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 GJA5P36382 358 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 OXCT1P55809 520 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 RAB14P61106 215 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 BMPR2Q13873 1038 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 HYIQ5T013 277 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 ACAD10Q6JQN1 1059 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms