RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 XIAPP98170 497 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 POU5F1BQ06416 359 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 CCDC153Q494R4 210 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 DLK2Q6UY11 383 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 IFNLR1Q8IU57 520 aaPredicted RBP13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 ZNF567Q8N184 647 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 NCSTNQ92542 709 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 NDRG1Q92597 394 aaKnown RBP13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 CPNE1Q99829 537 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 GORASP1Q9BQQ3 440 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 RNF19AQ9NV58 838 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 TUBGCP4Q9UGJ1 667 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 SYNJ2BP-COX16A0A087WUM0 186 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 USP12O75317 370 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 USP2O75604 605 aaPredicted RBP13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 CNMDO75829 334 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 IRF9Q00978 393 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 BST2Q10589 180 aaKnown RBP13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 GRM2Q14416 872 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 PDK3Q15120 406 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 ZNF484Q5JVG2 852 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 GRTP1Q5TC63 336 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 FBXL19Q6PCT2 694 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 STRA8Q7Z7C7 330 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 KBTBD6Q86V97 674 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 NME8Q8N427 588 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 OR52K1Q8NGK4 314 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 ZNF669Q96BR6 464 aaPredicted RBP13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 ZMAT2Q96NC0 199 aaKnown RBP13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 OR52B2Q96RD2 323 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 RBBP8Q99708 897 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 CAB39LQ9H9S4 337 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 COX16Q9P0S2 106 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 FZD10Q9ULW2 581 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 GOLGA8QA0A0J9YX86 632 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 GOLGA8OA6NCC3 632 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 CAPN8A6NHC0 703 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 GOLGA8NF8WBI6 632 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 G3V2L1 256 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 PRDX6P30041 224 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 SERPINB5P36952 375 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 SULT1E1P49888 294 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 SERPINB8P50452 374 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 IFRD2Q12894 506 aaPredicted RBP13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 DYNC1I2Q13409 638 aaKnown RBP13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 DLG2Q15700 870 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 SPANXN3Q5MJ09 141 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 ARHGAP17Q68EM7 881 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 NT5DC4Q86YG4 428 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 TP53INP2Q8IXH6 220 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 LINC01465Q8N7H1 131 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 ICA1LQ8NDH6 482 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 C18orf25Q96B23 403 aaPredicted RBP13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 GCNAQ96QF7 691 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 KCNK16Q96T55 309 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 AGAP2Q99490 1192 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 RTKNQ9BST9 563 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 ACSS2Q9NR19 701 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 INPP5FQ9Y2H2 1132 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 RALGAPA2Q2PPJ7 1873 aa13.55□□□□□ -0.24
SLC28A1-201ENST00000286749 CASQ2O14958 399 aaPredicted RBP13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 CREB3O43889 395 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 PIM1P11309 404 aaPredicted RBP13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 MAGEA12P43365 314 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 BCAT1P54687 386 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 PITX1P78337 314 aaPredicted RBP13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 ANKRD20A4Q4UJ75 823 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 GLRA4Q5JXX5 417 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 FSTL4Q6MZW2 842 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 SDCCAG8Q86SQ7 713 aaPredicted RBP13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 DEFB106AQ8N104 65 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 TDRD5Q8NAT2 981 aaKnown RBP13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 RNF139Q8WU17 664 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 MOCOSQ96EN8 888 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 PPP1R36Q96LQ0 422 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 AGAP3Q96P47 875 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 LENG8Q96PV6 779 aaPredicted RBP13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 PRDM12Q9H4Q4 367 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 TXNRD2Q9NNW7 524 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 SSX2IPQ9Y2D8 614 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 A0A096LPK6 155 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 KLHL33A6NCF5 533 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 KCNK1O00180 336 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 AIM2O14862 343 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 LGALS2P05162 132 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 PABPC4LP0CB38 370 aaKnown RBP13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 SPRP35270 261 aaPredicted RBP13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 GLUD2P49448 558 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 NUDT2P50583 147 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 FOLH1Q04609 750 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 MAP3K21Q5TCX8 1036 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 STRADAQ7RTN6 431 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 SATL1Q86VE3 508 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 ANKRD52Q8NB46 1076 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 FAM149B1Q96BN6 582 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 TCF7L2Q9NQB0 619 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 SNTG2Q9NY99 539 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 ADAM28Q9UKQ2 775 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 MAGED2Q9UNF1 606 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms