RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TMED1Q13445 227 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 RALGPS1Q5JS13 557 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 FAXCQ5TGI0 409 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 ARHGAP17Q68EM7 881 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 TRMT10BQ6PF06 316 aaKnown RBP10.64□□□□□ -0.71
SKA1-201ENST00000285116 NUP93Q8N1F7 819 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 SLC35F5Q8WV83 523 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 ATP2A3Q93084 1043 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 EBF4Q9BQW3 602 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 SMARCAD1Q9H4L7 1026 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 PDZD7Q9H5P4 517 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 C6orf203Q9P0P8 240 aaPredicted RBP10.64□□□□□ -0.71
SKA1-201ENST00000285116 HESX1Q9UBX0 185 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 INPP5FQ9Y2H2 1132 aa10.64□□□□□ -0.71
SKA1-201ENST00000285116 CCDC195A0A1B0GUA6 201 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 CAPN8A6NHC0 703 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 UNCXA6NJT0 531 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 H3BNX3 289 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 STK10O94804 968 aaKnown RBP10.63□□□□□ -0.71
SKA1-201ENST00000285116 PROCP04070 461 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 PRKCGP05129 697 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 PGAM1P18669 254 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 SLC1A6P48664 564 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 MTM1Q13496 603 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 BMPR2Q13873 1038 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 TMEM132DQ14C87 1099 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 PCLAFQ15004 111 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 MYLK3Q32MK0 819 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 RAB6CQ53S08 254 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 METTL21CQ5VZV1 264 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 PACS1Q6VY07 963 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 SLC26A9Q7LBE3 791 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 KBTBD6Q86V97 674 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 TMEM192Q8IY95 271 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 CDKL2Q92772 493 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 SLC13A1Q9BZW2 595 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 RAB6CQ9H0N0 254 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 ZNF395Q9H8N7 513 aaPredicted RBP10.63□□□□□ -0.71
SKA1-201ENST00000285116 GPBP1L1Q9HC44 474 aaPredicted RBP10.63□□□□□ -0.71
SKA1-201ENST00000285116 APOBEC2Q9Y235 224 aaKnown RBP10.63□□□□□ -0.71
SKA1-201ENST00000285116 TSC2P49815 1807 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 A0A0A0MRY4 1105 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 SLC22A2O15244 555 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 DNAJA2O60884 412 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 H2AFYO75367 372 aaKnown RBP10.63□□□□□ -0.71
SKA1-201ENST00000285116 PDE5AO76074 875 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 C22orf31O95567 290 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 ALDOAP04075 364 aaKnown RBP10.63□□□□□ -0.71
SKA1-201ENST00000285116 ADRM1Q16186 407 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 SLC10A6Q3KNW5 377 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 CCDC153Q494R4 210 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 ZNF484Q5JVG2 852 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 C1QTNF12Q5T7M4 302 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 LRRC71Q8N4P6 559 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 ZBTB8BQ8NAP8 495 aaPredicted RBP10.63□□□□□ -0.71
SKA1-201ENST00000285116 SLC7A14Q8TBB6 771 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 CMTM5Q96DZ9 223 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 DCUN1D1Q96GG9 259 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 PIWIL1Q96J94 861 aaKnown RBP10.63□□□□□ -0.71
SKA1-201ENST00000285116 SPATA13Q96N96 652 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 SORT1Q99523 831 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 GRIP2Q9C0E4 1043 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 MINDY3Q9H8M7 445 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 TBCCD1Q9NVR7 557 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 MTMR10Q9NXD2 777 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 SH3GLB1Q9Y371 365 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 COL1A2P08123 1366 aa10.63□□□□□ -0.71
SKA1-201ENST00000285116 INO80B-WBP1J3KQ70 363 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 SIN3BO75182 1162 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 GALK1P51570 392 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 PDE1CQ14123 709 aaPredicted RBP10.62□□□□□ -0.71
SKA1-201ENST00000285116 CA9Q16790 459 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 GOLGA7BQ2TAP0 167 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 USP41Q3LFD5 358 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 DUS1LQ6P1R4 473 aaKnown RBP10.62□□□□□ -0.71
SKA1-201ENST00000285116 UNC93AQ86WB7 457 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 SULF1Q8IWU6 871 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 MPP5Q8N3R9 675 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 CEP70Q8NHQ1 597 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 UBA3Q8TBC4 463 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 CCDC124Q96CT7 223 aaKnown RBP10.62□□□□□ -0.71
SKA1-201ENST00000285116 INO80BQ9C086 356 aaPredicted RBP10.62□□□□□ -0.71
SKA1-201ENST00000285116 SENP6Q9GZR1 1112 aaPredicted RBP10.62□□□□□ -0.71
SKA1-201ENST00000285116 UBAP1Q9NZ09 502 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 HEY1Q9Y5J3 304 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 EVPLQ92817 2033 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 TMEM114B3SHH9 223 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 TRMUO75648 421 aaKnown RBP10.62□□□□□ -0.71
SKA1-201ENST00000285116 IQCF3P0C7M6 154 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 EPHX2P34913 555 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 GLUD2P49448 558 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 IDH3AP50213 366 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 SLC10A2Q12908 348 aaPredicted RBP10.62□□□□□ -0.71
SKA1-201ENST00000285116 CNGA3Q16281 694 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 MROH9Q5TGP6 573 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 STRADAQ7RTN6 431 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 MAVSQ7Z434 540 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 PQLC1Q8N2U9 271 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 FBXW8Q8N3Y1 598 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 ZNF513Q8N8E2 541 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms