RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 RBM15BQ8NDT2 890 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 ZMIZ2Q8NF64 920 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 RAB3IL1Q8TBN0 382 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 ADAM32Q8TC27 787 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 TMEM209Q96SK2 561 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 FRMD8Q9BZ67 464 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 GPAMQ9HCL2 828 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 MKS1Q9NXB0 559 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 SPECC1L-ADORA2AF8WAN1 911 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 CHADO15335 359 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 ZNF623O75123 536 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 AP1G2O75843 785 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 ENO1P06733 434 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 CKBP12277 381 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 ACADSBP45954 432 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 CPA2P48052 419 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 DSG1Q02413 1049 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 NOMO1Q15155 1222 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 LGSNQ5TDP6 509 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 OTUD1Q5VV17 481 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 FAM35AQ86V20 835 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 CENPIQ92674 756 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 E2F7Q96AV8 911 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 GBP5Q96PP8 586 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 LBHD1Q9BQE6 289 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 LRRC4Q9HBW1 653 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 MTMR10Q9NXD2 777 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 PPARGC1AQ9UBK2 798 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 TRIM49D1C9J1S8 452 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 H7C0C1 242 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 TOMM70O94826 608 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 INHAP05111 366 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 SNRPAP09012 282 aaKnown RBP18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 FAM200BP0CF97 657 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 L1CAMP32004 1257 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 ATP5OP48047 213 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 SULT1E1P49888 294 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 MRPS5P82675 430 aaKnown RBP18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 RIPOR1Q6ZS17 1223 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 ULK2Q8IYT8 1036 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 GLT1D1Q96MS3 346 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 C1orf21Q9H246 121 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 SIRPGQ9P1W8 387 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 AP4E1Q9UPM8 1137 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 NR2E3Q9Y5X4 410 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 CCNFP41002 786 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 MATKP42679 507 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 TMPRSS15P98073 1019 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 ROR1Q01973 937 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 BST1Q10588 318 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 CDHR3Q6ZTQ4 885 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 MAP7D3Q8IWC1 876 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 ARHGAP18Q8N392 663 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 KCTD15Q96SI1 283 aaPredicted RBP18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 ULBP1Q9BZM6 244 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 NDE1Q9NXR1 346 aa18.8■□□□□ 0.6
PDLIM3-201ENST00000284767 TDRD15B5MCY1 1934 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 MDM4O15151 490 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 RTN3O95197 1032 aaPredicted RBP18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 CYP2F1P24903 491 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 CRABP2P29373 138 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 BCAR1P56945 870 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 GBE1Q04446 702 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 PDK2Q15119 407 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 HSF5Q4G112 596 aaPredicted RBP18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 LHX8Q68G74 356 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 SIX6OS1Q8N1H7 587 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 PANX3Q96QZ0 392 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 ETNK2Q9NVF9 386 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 TMLHEQ9NVH6 421 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 TTLL3Q9Y4R7 772 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 YJEFN3A6XGL0 299 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 C1QAP02745 245 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 LYNP07948 512 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 LHX1P48742 406 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 YWHAZP63104 245 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 NME3Q13232 169 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 TFDP2Q14188 446 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 EFHC1Q5JVL4 640 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 TRAF7Q6Q0C0 670 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 KYAT3Q6YP21 454 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 ARID3BQ8IVW6 561 aaPredicted RBP18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 ECSITQ9BQ95 431 aa18.79■□□□□ 0.6
PDLIM3-201ENST00000284767 TRDMT1O14717 391 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 APOL1O14791 398 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 FYNP06241 537 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 USP17L7P0C7H9 530 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 GOT1P17174 413 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 RBL1P28749 1068 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 POLE2P56282 527 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 SLC10A2Q12908 348 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 TEX44Q53QW1 395 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 IZUMO2Q6UXV1 221 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 LINC01599Q8WXQ3 324 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 CCDC106Q9BWC9 280 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 SORCS3Q9UPU3 1222 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 A0A1W2PQ45 241 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 A0A1W2PQY0 241 aa18.78■□□□□ 0.6
PDLIM3-201ENST00000284767 FKBP6O75344 327 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms