RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 LONRF1Q17RB8 773 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ATP13A4Q4VNC1 1196 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 GPR158Q5T848 1215 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 LYPLAL1Q5VWZ2 237 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ZFP1Q6P2D0 407 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 STRA8Q7Z7C7 330 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 C11orf74Q86VG3 221 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 SLC44A2Q8IWA5 706 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FIBCD1Q8N539 461 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PAFAH2Q99487 392 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 APBA2Q99767 749 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CPNE1Q99829 537 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PRMT1Q99873 361 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 THTPAQ9BU02 230 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ELOVL2Q9NXB9 296 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ARL15Q9NXU5 204 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D14Q9P2M4 693 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FAM153AQ9UHL3 310 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ANGPT4Q9Y264 503 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D30Q9Y2I9 924 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 IRAK3Q9Y616 596 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PROSCO94903 275 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FGFR1P11362 822 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 WEE1P30291 646 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 COILP38432 576 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ATP12AP54707 1039 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 HERVK_113P62684 666 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CDK16Q00536 496 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 COX10Q12887 443 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 DNAJC3Q13217 504 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF268Q14587 947 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 IQSEC1Q6DN90 963 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 RPTNQ6XPR3 784 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ATG9AQ7Z3C6 839 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 NECAB2Q7Z6G3 386 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 NT5DC3Q86UY8 548 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FBXO36Q8NEA4 188 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ENKURQ8TC29 256 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CENPIQ92674 756 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 POLR1BQ9H9Y6 1135 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PRDM8Q9NQV8 689 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CKLFQ9UBR5 152 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TAGLN3Q9UI15 199 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 RPS6KA6Q9UK32 745 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 HBS1LQ9Y450 684 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 KNTC1P50748 2209 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TTLL8A6PVC2 850 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CHURC1-FNTBB4DL54 471 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 MCIDASD6RGH6 385 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 SERPINB7O75635 380 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 HMGCRP04035 888 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 KLRC1P26715 233 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ACADLP28330 430 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF846Q147U1 533 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CBWD6Q4V339 395 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 GLRA4Q5JXX5 417 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 SHC4Q6S5L8 630 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CYP20A1Q6UW02 462 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 RD3Q7Z3Z2 195 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ABRAQ8N0Z2 381 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 MIER2Q8N344 545 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF786Q8N393 782 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TRPV3Q8NET8 790 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TTLL2Q9BWV7 592 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 VPS45Q9NRW7 570 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TRPS1Q9UHF7 1281 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 RABGEF1Q9UJ41 708 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PTCH2Q9Y6C5 1203 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ANKDD1BA6NHY2 528 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 NCF1BA6NI72 391 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 NCF1CA8MVU1 366 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FAM25AB3EWG3 89 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FAM25CB3EWG5 89 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FAM25GB3EWG6 89 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 UBE2Q2LH0YL09 131 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PDE9AO76083 593 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 EPN2O95208 641 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CAPN1P07384 714 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 NCF1P14598 390 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 INSRRP14616 1297 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PBLDP30039 288 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 GP5P40197 560 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 GPR1P46091 355 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 RPL21P46778 160 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TRIM32Q13049 653 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PGS1Q32NB8 556 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PAN2Q504Q3 1202 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ANKRD23Q86SG2 305 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 LONP2Q86WA8 852 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 COL23A1Q86Y22 540 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TRAPPC5Q8IUR0 188 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PHYKPLQ8IUZ5 450 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FAM20CQ8IXL6 584 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 DPF2Q92785 391 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TMEM176AQ96HP8 235 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 NSMCE2Q96MF7 247 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FAM111AQ96PZ2 611 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 SLC38A2Q96QD8 506 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CBWD1Q9BRT8 395 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms