RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 DSG1Q02413 1049 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 FPGSQ05932 587 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 AUHQ13825 339 aaKnown RBP11.27□□□□□ -0.6
GGPS1-201ENST00000282841 MS4A13Q5J8X5 152 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 TMEM240Q5SV17 173 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 C3orf62Q6ZUJ4 267 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 CENPUQ71F23 418 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 CAND1Q86VP6 1230 aaKnown RBP11.27□□□□□ -0.6
GGPS1-201ENST00000282841 BBOF1Q8ND07 529 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 CCHCR1Q8TD31 782 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 SERPINB11Q96P15 392 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 C17orf80Q9BSJ5 609 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 KLC2Q9H0B6 622 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 MRPL17Q9NRX2 175 aaKnown RBP11.27□□□□□ -0.6
GGPS1-201ENST00000282841 PAK5Q9P286 719 aa11.27□□□□□ -0.6
GGPS1-201ENST00000282841 RGS16O15492 202 aaPredicted RBP11.27□□□□□ -0.61
GGPS1-201ENST00000282841 GJB3O75712 270 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 RFC2P35250 354 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 ALDH1A3P47895 512 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 RPL10AP62906 217 aaKnown RBP11.27□□□□□ -0.61
GGPS1-201ENST00000282841 CAV1Q03135 178 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 PAFAH1B3Q15102 231 aaKnown RBP11.27□□□□□ -0.61
GGPS1-201ENST00000282841 TTC31Q49AM3 519 aaPredicted RBP11.27□□□□□ -0.61
GGPS1-201ENST00000282841 STXBP5Q5T5C0 1151 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 PLPP4Q5VZY2 271 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 TXNDC8Q6A555 127 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 FBXL22Q6P050 247 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 TRMT10CQ7L0Y3 403 aaKnown RBP11.27□□□□□ -0.61
GGPS1-201ENST00000282841 DENND1CQ8IV53 801 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 FIBCD1Q8N539 461 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 SPATA22Q8NHS9 363 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 SMG9Q9H0W8 520 aaKnown RBP11.27□□□□□ -0.61
GGPS1-201ENST00000282841 KIF9Q9HAQ2 790 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 ZNF334Q9HCZ1 680 aaPredicted RBP11.27□□□□□ -0.61
GGPS1-201ENST00000282841 RRN3Q9NYV6 651 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 SLC17A6Q9P2U8 582 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 SHOC2Q9UQ13 582 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 PATJQ8NI35 1801 aa11.27□□□□□ -0.61
GGPS1-201ENST00000282841 GREB1Q4ZG55 1949 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 COCHO43405 550 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 TLL1O43897 1013 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 RTN3O95197 1032 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 CXCL14O95715 111 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 NUDT17P0C025 328 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 LINC00271P0C7V0 271 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 TPH1P17752 444 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 NR1D1P20393 614 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 PTPN3P26045 913 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 ELF1P32519 619 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 MLLT6P55198 1093 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 ARL4CP56559 192 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 PDK1Q15118 436 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 PRKD1Q15139 912 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 ZNF697Q5TEC3 545 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 NADSYN1Q6IA69 706 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 CASC4Q6P4E1 433 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 LRIG3Q6UXM1 1119 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 DNAJB7Q7Z6W7 309 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 PSTKQ8IV42 348 aaKnown RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 HS6ST3Q8IZP7 471 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 PDIK1LQ8N165 341 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 MGARPQ8TDB4 240 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 SLC22A17Q8WUG5 538 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 SLC39A13Q96H72 371 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 KLHL5Q96PQ7 755 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 SELENOSQ9BQE4 189 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 FRMD8P1Q9BZ68 369 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 ATXN3LQ9H3M9 355 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 AFF4Q9UHB7 1163 aaKnown RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 TLR6Q9Y2C9 796 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 A0A0A0MRY4 1105 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 ZNF840PA6NDX5 716 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 TGM5O43548 720 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 FAM155BO75949 473 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 ABLIM3O94929 683 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 LAG3P18627 525 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 GARSP41250 739 aaKnown RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 CYP4F8P98187 520 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 TMED2Q15363 201 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 PRPF39Q86UA1 669 aaKnown RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 ARHGAP12Q8IWW6 846 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 PALM2Q8IXS6 379 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 SPATA13Q96N96 652 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 RPRD1AQ96P16 312 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 KDM4CQ9H3R0 1056 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 IL37Q9NZH6 218 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 RCOR3Q9P2K3 495 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 PCDHB12Q9Y5F1 795 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 EXOC1LA0A1B0GW35 172 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 J3KR12 359 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 PER2O15055 1255 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 GCATO75600 419 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 MT-CYBP00156 380 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 APOEP02649 317 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 KLKB1P03952 638 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 CD68P34810 354 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-201ENST00000282841 ETFBP38117 255 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 SGSHP51688 502 aa11.26□□□□□ -0.61
GGPS1-201ENST00000282841 MAXP61244 160 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms