RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 STAMBPL1Q96FJ0 436 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 SPATA13Q96N96 652 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 CPXM1Q96SM3 734 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 ROPN1BQ9BZX4 212 aaPredicted RBP7.97□□□□□ -1.13
EPHA4-201ENST00000281821 ROPN1Q9HAT0 212 aaPredicted RBP7.97□□□□□ -1.13
EPHA4-201ENST00000281821 DNTTP04053 509 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 PCSK2P16519 638 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 PTPN7P35236 360 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 CXCR3P49682 368 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 MLLT6P55198 1093 aaPredicted RBP7.97□□□□□ -1.13
EPHA4-201ENST00000281821 OTUD4Q01804 1114 aaKnown RBP7.97□□□□□ -1.13
EPHA4-201ENST00000281821 TRADDQ15628 312 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 CHRDL2Q6WN34 429 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 RAB3IL1Q8TBN0 382 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 CCDC110Q8TBZ0 833 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 TRIM56Q9BRZ2 755 aaKnown RBP7.97□□□□□ -1.13
EPHA4-201ENST00000281821 OSBPL1AQ9BXW6 950 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 CRLS1Q9UJA2 301 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 E5RI56 91 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 RASGRF2O14827 1237 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 MLNP12872 115 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 KCNA4P22459 653 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 USP4Q13107 963 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 DNAJC3Q13217 504 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 MTF1Q14872 753 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 SETDB1Q15047 1291 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 INAVAQ3KP66 663 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 SPDYCQ5MJ68 293 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 RBM23Q86U06 439 aaKnown RBP7.97□□□□□ -1.13
EPHA4-201ENST00000281821 KBTBD6Q86V97 674 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 JAMLQ86YT9 394 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 PCDH20Q8N6Y1 951 aaKnown RBP7.97□□□□□ -1.13
EPHA4-201ENST00000281821 ZBTB10Q96DT7 871 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 PANX3Q96QZ0 392 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 SYTL2Q9HCH5 934 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 KCNK9Q9NPC2 374 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 CCL16O15467 120 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 PAGE1O75459 146 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 POP4O95707 220 aaKnown RBP7.97□□□□□ -1.13
EPHA4-201ENST00000281821 JCHAINP01591 159 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 TMEM63BQ5T3F8 832 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 PMF1Q6P1K2 205 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 FBXL19Q6PCT2 694 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 DRICH1Q6PGQ1 229 aaPredicted RBP7.97□□□□□ -1.13
EPHA4-201ENST00000281821 POTEHQ6S545 545 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 ZMAT2Q96NC0 199 aaKnown RBP7.97□□□□□ -1.13
EPHA4-201ENST00000281821 GPR62Q9BZJ7 368 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 DRC3Q9H069 523 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 SAYSD1Q9NPB0 183 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 SUSD2Q9UGT4 822 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 DOLKQ9UPQ8 538 aa7.97□□□□□ -1.13
EPHA4-201ENST00000281821 FSCN2O14926 492 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 PER2O15055 1255 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 ERCC2P18074 760 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 HTR1BP28222 390 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 GEN1Q17RS7 908 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 HGSNATQ68CP4 663 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 AHI1Q8N157 1196 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 PPP1R13LQ8WUF5 828 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 SPACA7Q96KW9 195 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 ZNF576Q9H609 170 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 VANGL2Q9ULK5 521 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 CCDC195A0A1B0GUA6 201 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 TBL1XO60907 577 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 RNF40O75150 1001 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 CDH16O75309 829 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 HOXC13P31276 330 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 ITGA9Q13797 1035 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 FASTKD1Q53R41 847 aaKnown RBP7.96□□□□□ -1.13
EPHA4-201ENST00000281821 BEND7Q8N7W2 519 aaPredicted RBP7.96□□□□□ -1.13
EPHA4-201ENST00000281821 SH3RF2Q8TEC5 729 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 TTLL2Q9BWV7 592 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 SCML1Q9UN30 329 aa7.96□□□□□ -1.13
EPHA4-201ENST00000281821 TROVE2P10155 538 aaKnown RBP eCLIP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 PSMC3P17980 439 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 BMP8BP34820 402 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 DRG2P55039 364 aaKnown RBP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 HTRA4P83105 476 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 GNA12Q03113 381 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 CCDC38Q502W7 563 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 ADAT2Q7Z6V5 191 aaKnown RBP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 DENND1CQ8IV53 801 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 PGAP3Q96FM1 320 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 ZBP1Q9H171 429 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 CRTAC1Q9NQ79 661 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 KLHL11Q9NVR0 708 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 STK38LQ9Y2H1 464 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 DDHD2O94830 711 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 IL9RQ01113 521 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 ZNF211Q13398 564 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 RAP1GAP2Q684P5 730 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 PPM1EQ8WY54 764 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 NKD2Q969F2 451 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 ULK4Q96C45 1275 aa7.96□□□□□ -1.14
EPHA4-201ENST00000281821 DDX47Q9H0S4 455 aaKnown RBP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 DNAJC17Q9NVM6 304 aaKnown RBP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 ZC3H7BQ9UGR2 993 aaKnown RBP7.96□□□□□ -1.14
EPHA4-201ENST00000281821 SNX24Q9Y343 169 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms