RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 PYROXD2Q8N2H3 581 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 ZNF366Q8N895 744 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 TC2NQ8N9U0 490 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 FIBINQ8TAL6 211 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 ZNF564Q8TBZ8 553 aaPredicted RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 HSPH1Q92598 858 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 TBC1D31Q96DN5 1066 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 ARHGEF26Q96DR7 871 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 FAM122AQ96E09 287 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 BTBD6Q96KE9 485 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 HAPLN3Q96S86 360 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 ACOX2Q99424 681 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 EPAS1Q99814 870 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 PRMT1Q99873 361 aaKnown RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 HINFPQ9BQA5 517 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 SPON2Q9BUD6 331 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 IRX2Q9BZI1 471 aaPredicted RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 ZYG11BQ9C0D3 744 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 DHX35Q9H5Z1 703 aaKnown RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 LUC7LQ9NQ29 371 aaKnown RBP6.73□□□□□ -1.33
CD44-204ENST00000279452 ELOVL2Q9NXB9 296 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 OR12D3Q9UGF7 316 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 IP6K2Q9UHH9 426 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 SLC25A13Q9UJS0 675 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 AP4E1Q9UPM8 1137 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 STON1Q9Y6Q2 735 aa6.73□□□□□ -1.33
CD44-204ENST00000279452 MIA3Q5JRA6 1907 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 MYO10Q9HD67 2058 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 GOLGA6L3A6NEY3 463 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 SOWAHDA6NJG2 315 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 WASH3PC4AMC7 463 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 I6L893 689 aaPredicted RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 K7ESF4 209 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 MYO1FO00160 1098 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 EEF2KO00418 725 aaKnown RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 AXIN1O15169 862 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 TIMM44O43615 452 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 BNIP3LO60238 219 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ADAM23O75077 832 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ENDOD1O94919 500 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ASLP04424 464 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 CYP1A2P05177 515 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 DLDP09622 509 aaKnown RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 TMEM253P0C7T8 217 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 TNNT1P13805 278 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 PRKCHP24723 683 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 MZF1P28698 734 aaPredicted RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 EPHB2P29323 1055 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 MIPP30301 263 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 CDC25BP30305 580 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 HOXC13P31276 330 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 IL12RB1P42701 662 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 CTSOP43234 321 aaPredicted RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 NOP2P46087 812 aaKnown RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 AIF1P55008 147 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 NAP1L1P55209 391 aaKnown RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 NHLH1Q02575 133 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ZNF252P-AS1Q0IIN9 211 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 SRSF5Q13243 272 aaKnown RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 PIGHQ14442 188 aaPredicted RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 KRT81Q14533 505 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ARID5BQ14865 1188 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 SMTNL2Q2TAL5 461 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 PLEKHG6Q3KR16 790 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ZNF528Q3MIS6 628 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ACCSLQ4AC99 568 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ALFQ53S48 1182 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ODF2Q5BJF6 829 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 TMEM215Q68D42 235 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 IL31Q6EBC2 164 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 TMEM92Q6UXU6 159 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 ADIPOR2Q86V24 386 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 LONP2Q86WA8 852 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 MAML2Q8IZL2 1156 aaPredicted RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 APCDD1Q8J025 514 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 CAMKK1Q8N5S9 505 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.72□□□□□ -1.33
CD44-204ENST00000279452 KCNV2Q8TDN2 545 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 CENPIQ92674 756 aaPredicted RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 NTAN1Q96AB6 310 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 SPACA7Q96KW9 195 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 RPL10LQ96L21 214 aaKnown RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 C1orf74Q96LT6 269 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 PANX2Q96RD6 677 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 PPP1R9BQ96SB3 815 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 SNRNP25Q9BV90 132 aaKnown RBP6.72□□□□□ -1.33
CD44-204ENST00000279452 ATP13A1Q9HD20 1204 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 ZSCAN32Q9NX65 697 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 DNAI1Q9UI46 699 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 FBXO10Q9UK96 956 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 RAB23Q9ULC3 237 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 FZD10Q9ULW2 581 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 USP18Q9UMW8 372 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 INVSQ9Y283 1065 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 STARD13Q9Y3M8 1113 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 PCDHGA2Q9Y5H1 932 aa6.72□□□□□ -1.33
CD44-204ENST00000279452 KIAA1549LQ6ZVL6 1849 aa6.71□□□□□ -1.33
CD44-204ENST00000279452 A0A0A0MRY4 1105 aa6.71□□□□□ -1.34
CD44-204ENST00000279452 FAM72CH0Y354 149 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms