RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 FAM210AQ96ND0 272 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 NDUFA13Q9P0J0 144 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 FAF1Q9UNN5 650 aaPredicted RBP13.22□□□□□ -0.29
COL8A1-202ENST00000273342 BCLAF3A2AJT9 711 aaKnown RBP13.21□□□□□ -0.29
COL8A1-202ENST00000273342 TMEM233B4DJY2 109 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 GOT1P17174 413 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 HDCP19113 662 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 MX2P20592 715 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 GRK2P25098 689 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 ETFBP38117 255 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 MAGEA10P43363 369 aaPredicted RBP13.21□□□□□ -0.29
COL8A1-202ENST00000273342 IGBP1P78318 339 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 HSP90AA5PQ58FG0 334 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 SH3D19Q5HYK7 790 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 IL23RQ5VWK5 629 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 JADE1Q6IE81 842 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 KLC3Q6P597 504 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 STRA8Q7Z7C7 330 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 NDRG1Q92597 394 aaKnown RBP13.21□□□□□ -0.29
COL8A1-202ENST00000273342 MKS1Q9NXB0 559 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 TMX2-CTNND1H3BSU7 103 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 BOLA2-SMG1P6H3BVE0 249 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 DENRO43583 198 aaKnown RBP13.21□□□□□ -0.29
COL8A1-202ENST00000273342 SEC24DO94855 1032 aaPredicted RBP13.21□□□□□ -0.29
COL8A1-202ENST00000273342 PSMB4P28070 264 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 STAT5BP51692 787 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 XIAPP98170 497 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 ITGA7Q13683 1181 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 GOLGA7BQ2TAP0 167 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 ITPRIPL1Q6GPH6 555 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 EPGNQ6UW88 154 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 ACOT1Q86TX2 421 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 ZNF410Q86VK4 478 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 ZNF669Q96BR6 464 aaPredicted RBP13.21□□□□□ -0.29
COL8A1-202ENST00000273342 SGF29Q96ES7 293 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 WRNIP1Q96S55 665 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 PCYT2Q99447 389 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 RTKNQ9BST9 563 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 RBM38Q9H0Z9 239 aaKnown RBP13.21□□□□□ -0.29
COL8A1-202ENST00000273342 MINDY3Q9H8M7 445 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 WDR41Q9HAD4 459 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 DMTF1Q9Y222 760 aa13.21□□□□□ -0.29
COL8A1-202ENST00000273342 MAFBQ9Y5Q3 323 aaPredicted RBP13.21□□□□□ -0.29
COL8A1-202ENST00000273342 A0A096LPK6 155 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 LACTBL1A8MY62 500 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 STRNO43815 780 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 MT-CO1P00395 513 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 TPH1P17752 444 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 SOX11P35716 441 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 ENPEPQ07075 957 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 RALGDSQ12967 914 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 ATF7IP2Q5U623 682 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 KLHL35Q6PF15 583 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 POTEAQ6S8J7 498 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 FAM131BQ86XD5 332 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 CDKL3Q8IVW4 592 aaPredicted RBP13.21□□□□□ -0.3
COL8A1-202ENST00000273342 NLRP7Q8WX94 980 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 LPAR1Q92633 364 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 LRRC39Q96DD0 335 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 SCYL1Q96KG9 808 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 FCRL3Q96P31 734 aaPredicted RBP13.21□□□□□ -0.3
COL8A1-202ENST00000273342 GATA5Q9BWX5 397 aaPredicted RBP13.21□□□□□ -0.3
COL8A1-202ENST00000273342 MRPS26Q9BYN8 205 aaKnown RBP13.21□□□□□ -0.3
COL8A1-202ENST00000273342 SUDS3Q9H7L9 328 aaPredicted RBP13.21□□□□□ -0.3
COL8A1-202ENST00000273342 RPF1Q9H9Y2 349 aaKnown RBP13.21□□□□□ -0.3
COL8A1-202ENST00000273342 C6orf203Q9P0P8 240 aaPredicted RBP13.21□□□□□ -0.3
COL8A1-202ENST00000273342 RIMS3Q9UJD0 308 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 SNX13Q9Y5W8 968 aa13.21□□□□□ -0.3
COL8A1-202ENST00000273342 MRPL42Q9Y6G3 142 aaKnown RBP13.21□□□□□ -0.3
COL8A1-202ENST00000273342 SPATA31C2B4DYI2 1134 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 PHGDHO43175 533 aaKnown RBP13.2□□□□□ -0.3
COL8A1-202ENST00000273342 CILPO75339 1184 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 PSMC3P17980 439 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 CDH2P19022 906 aaPredicted RBP13.2□□□□□ -0.3
COL8A1-202ENST00000273342 TGM2P21980 687 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 CLCN3P51790 818 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 NAGLUP54802 743 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 DCTN2Q13561 401 aaKnown RBP13.2□□□□□ -0.3
COL8A1-202ENST00000273342 TMEM132BQ14DG7 1078 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 KCTD21Q4G0X4 260 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 BOLA3Q53S33 107 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 CCDC185Q8N715 623 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 CCNYL1Q8N7R7 359 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 MCUQ8NE86 351 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 OR52K1Q8NGK4 314 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 ARNTL2Q8WYA1 636 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 ERLEC1Q96DZ1 483 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 CIB1Q99828 191 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 OMDQ99983 421 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 FERMT1Q9BQL6 677 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 TRPV6Q9H1D0 765 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 DTLQ9NZJ0 730 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 CDY2AQ9Y6F7 541 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 CDY1Q9Y6F8 540 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 ARHGAP10A1A4S6 786 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 C7orf72A4D263 438 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 PIGNO95427 931 aa13.2□□□□□ -0.3
COL8A1-202ENST00000273342 THRAP10827 490 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms