RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 MICAL3Q7RTP6 2002 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 KCNU1A8MYU2 1149 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 UPP2O95045 317 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 HAPLN1P10915 354 aaPredicted RBP15.71■□□□□ 0.1
SF3B4-201ENST00000271628 CREB1P16220 341 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 PTPN3P26045 913 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 ACBD5Q5T8D3 534 aaPredicted RBP15.71■□□□□ 0.1
SF3B4-201ENST00000271628 RNF19BQ6ZMZ0 732 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 ZNF534Q76KX8 674 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 PDCD7Q8N8D1 485 aaKnown RBP15.71■□□□□ 0.1
SF3B4-201ENST00000271628 GBP7Q8N8V2 638 aaPredicted RBP15.71■□□□□ 0.1
SF3B4-201ENST00000271628 EBNA1BP2Q99848 306 aaKnown RBP15.71■□□□□ 0.1
SF3B4-201ENST00000271628 YY1AP1Q9H869 796 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 DONSONQ9NYP3 566 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 HCSTQ9UBK5 93 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 SLC27A5Q9Y2P5 690 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 USP15Q9Y4E8 981 aaPredicted RBP15.71■□□□□ 0.1
SF3B4-201ENST00000271628 SNX10Q9Y5X0 201 aa15.71■□□□□ 0.1
SF3B4-201ENST00000271628 KCNK1O00180 336 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 MSI1O43347 362 aaKnown RBP15.7■□□□□ 0.1
SF3B4-201ENST00000271628 SUN1O94901 812 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 OAS1P00973 400 aaKnown RBP15.7■□□□□ 0.1
SF3B4-201ENST00000271628 GBP2P32456 591 aaPredicted RBP15.7■□□□□ 0.1
SF3B4-201ENST00000271628 PBX3P40426 434 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 MLLT6P55198 1093 aaPredicted RBP15.7■□□□□ 0.1
SF3B4-201ENST00000271628 USP46P62068 366 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 TEX44Q53QW1 395 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 FAM182AQ5T1J6 154 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 MANEALQ5VSG8 457 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 ITPRIPL1Q6GPH6 555 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.7■□□□□ 0.1
SF3B4-201ENST00000271628 CYS1Q717R9 158 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 TP53INP2Q8IXH6 220 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 AGGF1Q8N302 714 aaeCLIP15.7■□□□□ 0.1
SF3B4-201ENST00000271628 NETO2Q8NC67 525 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 FBXO22Q8NEZ5 403 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 CKAP2Q8WWK9 683 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 SLC39A13Q96H72 371 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 SEPT5Q99719 369 aaPredicted RBP15.7■□□□□ 0.1
SF3B4-201ENST00000271628 TRABDQ9H4I3 376 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 TMEM39AQ9NV64 488 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 GMIPQ9P107 970 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 NUDT5Q9UKK9 219 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 TBX21Q9UL17 535 aa15.7■□□□□ 0.1
SF3B4-201ENST00000271628 SMG5Q9UPR3 1016 aaKnown RBP15.7■□□□□ 0.1
SF3B4-201ENST00000271628 IQANK1A0A1B0GTG1 560 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 CFAP73A6NFT4 308 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 FAM47DPA6NHR8 397 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 ERI2A8K979 691 aaKnown RBP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 PRPF4O43172 522 aaKnown RBP eCLIP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 MGRN1O60291 552 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 PSMB4P28070 264 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 TBX4P57082 545 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 PKN2Q16513 984 aaKnown RBP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 SLC8B1Q6J4K2 584 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 RSPO2Q6UXX9 243 aaPredicted RBP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 TAS1R1Q7RTX1 841 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 TMEM173Q86WV6 379 aaPredicted RBP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 TTC9BQ8N6N2 239 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 NAT9Q9BTE0 207 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 SSU72Q9NP77 194 aaKnown RBP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 FNIP2Q9P278 1114 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 BACE2Q9Y5Z0 518 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 CDY1Q9Y6F8 540 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 SDR42E2A6NKP2 422 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 TCP11X1B4DZS4 312 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 EFEMP2O95967 443 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 APOEP02649 317 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 INHBAP08476 426 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 PRKCHP24723 683 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 CCNCP24863 283 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 TUFMP49411 452 aaKnown RBP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 TAF10Q12962 218 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 DUSP4Q13115 394 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 MTA1Q13330 715 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 LRRC14Q15048 493 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 KBTBD12Q3ZCT8 623 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 NUGGCQ68CJ6 796 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 LRRC49Q8IUZ0 686 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 GSDMBQ8TAX9 411 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 DCAKDQ8WVC6 231 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 SLC44A1Q8WWI5 657 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 ALKBH8Q96BT7 664 aaKnown RBP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 MRRFQ96E11 262 aaKnown RBP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 CFAP36Q96G28 342 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 TSGA13Q96PP4 275 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 TACO1Q9BSH4 297 aaKnown RBP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 CWH43Q9H720 699 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.69■□□□□ 0.1
SF3B4-201ENST00000271628 MTRRQ9UBK8 725 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 NEU3Q9UQ49 428 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 ATP11BQ9Y2G3 1177 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 MAD1L1Q9Y6D9 718 aa15.69■□□□□ 0.1
SF3B4-201ENST00000271628 E9PAM4 449 aa15.68■□□□□ 0.1
SF3B4-201ENST00000271628 CLTBP09497 229 aa15.68■□□□□ 0.1
SF3B4-201ENST00000271628 TUBP50607 506 aa15.68■□□□□ 0.1
SF3B4-201ENST00000271628 LGSNQ5TDP6 509 aa15.68■□□□□ 0.1
SF3B4-201ENST00000271628 SLC26A11Q86WA9 606 aa15.68■□□□□ 0.1
SF3B4-201ENST00000271628 LRRC6Q86X45 466 aa15.68■□□□□ 0.1
SF3B4-201ENST00000271628 ATP6V0D2Q8N8Y2 350 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms