RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 VAT1Q99536 393 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 TTPALQ9BTX7 342 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 GBA3Q9H227 469 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 CLIC5Q9NZA1 410 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 TRHDEQ9UKU6 1024 aa17.06■□□□□ 0.32
CCDC40-201ENST00000269318 IQANK1A0A1B0GTG1 560 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 SDR42E2A6NKP2 422 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 FAM159BA6NKW6 160 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 SUN1O94901 812 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 RTN3O95197 1032 aaPredicted RBP17.05■□□□□ 0.32
CCDC40-201ENST00000269318 INHBAP08476 426 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 RPA3P35244 121 aaPredicted RBP17.05■□□□□ 0.32
CCDC40-201ENST00000269318 KCTD11Q693B1 232 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 TRMT10BQ6PF06 316 aaKnown RBP17.05■□□□□ 0.32
CCDC40-201ENST00000269318 CYS1Q717R9 158 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 PIGWQ7Z7B1 504 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 LRRC6Q86X45 466 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 VWCEQ96DN2 955 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 STAMBPL1Q96FJ0 436 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 C1orf74Q96LT6 269 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 MAGEB18Q96M61 343 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 TSGA13Q96PP4 275 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 OXCT2Q9BYC2 517 aaPredicted RBP17.05■□□□□ 0.32
CCDC40-201ENST00000269318 CRISPLD2Q9H0B8 497 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 CATSPERBQ9H7T0 1116 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 MOCS1Q9NZB8 636 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 ZNF180Q9UJW8 692 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 FAM169AQ9Y6X4 670 aa17.05■□□□□ 0.32
CCDC40-201ENST00000269318 ATXN2Q99700 1313 aaKnown RBP17.05■□□□□ 0.32
CCDC40-201ENST00000269318 MICAL3Q7RTP6 2002 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 WDR27A2RRH5 827 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 TCP11X1B4DZS4 312 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 E9PAM4 449 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 AP2A1O95782 977 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 VIMP08670 466 aaKnown RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 MLLT6P55198 1093 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 MGAT5BQ3V5L5 792 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 PIK3R6Q5UE93 754 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 PRSS55Q6UWB4 352 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 SH2D5Q6ZV89 423 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 C14orf80Q86SX3 495 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 TAX1BP1Q86VP1 789 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 C2orf15Q8WU43 125 aaKnown RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 FBXO32Q969P5 355 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 RRP15Q9Y3B9 282 aaKnown RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 IKBKGQ9Y6K9 419 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 COL4A6Q14031 1691 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 MYO18AQ92614 2054 aaKnown RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 FAM155BO75949 473 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 ALDH1A2O94788 518 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 MOCS2O96007 188 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 CA4P22748 312 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 MGAT1P26572 445 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 COG7P83436 770 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 C1orf53Q5VUE5 145 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 AFMIDQ63HM1 303 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 RNF168Q8IYW5 571 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 ZNF683Q8IZ20 524 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 CACNA2D3Q8IZS8 1091 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 LZTR1Q8N653 840 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 PPM1NQ8N819 430 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 BANPQ8N9N5 519 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 OXNAD1Q96HP4 312 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 TEKT5Q96M29 485 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 AGAP3Q96P47 875 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 SEPT5Q99719 369 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 MLPHQ9BV36 600 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 NDFIP2Q9NV92 336 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 PIH1D1Q9NWS0 290 aaKnown RBP17.04■□□□□ 0.32
CCDC40-201ENST00000269318 COMMD8Q9NX08 183 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 TBX21Q9UL17 535 aa17.04■□□□□ 0.32
CCDC40-201ENST00000269318 CSH1P0DML2 217 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 CSH2P0DML3 217 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 SLC2A3P11169 496 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 CCNCP24863 283 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 FOXN2P32314 431 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 PSEN1P49768 467 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 TUBP50607 506 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 TBX4P57082 545 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 SESN2P58004 480 aaPredicted RBP17.03■□□□□ 0.32
CCDC40-201ENST00000269318 CRADDP78560 199 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 IL9RQ01113 521 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 TAF10Q12962 218 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 DUSP4Q13115 394 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 SPARCL1Q14515 664 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 SLC1A5Q15758 541 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 RASIP1Q5U651 963 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 ITPRIPL1Q6GPH6 555 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 ARHGAP36Q6ZRI8 547 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 MICALCLQ6ZW33 695 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 CCNJLQ8IV13 435 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 CTAGE3PQ8IX95 158 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 KLHDC8BQ8IXV7 354 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 CNTD1Q8N815 330 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 RTL3Q8N8U3 475 aaKnown RBP17.03■□□□□ 0.32
CCDC40-201ENST00000269318 ALKBH8Q96BT7 664 aaKnown RBP17.03■□□□□ 0.32
CCDC40-201ENST00000269318 SERAC1Q96JX3 654 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 VN1R3Q9BXE9 311 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 CWH43Q9H720 699 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms