RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MRPS5P82675 430 aaKnown RBP15.73■□□□□ 0.11
TIMP3-201ENST00000266085 PSMD5Q16401 504 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 CCDC153Q494R4 210 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 SLC24A5Q71RS6 500 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 SIAH1Q8IUQ4 282 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 FAM9CQ8IZT9 166 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 NR2E3Q9Y5X4 410 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 FSCN2O14926 492 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 CHADO15335 359 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 ERCC2P18074 760 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 OR1D2P34982 312 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 SFSWAPQ12872 951 aaKnown RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 HGSNATQ68CP4 663 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 TEX9Q8N6V9 391 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 PHF21BQ96EK2 531 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 DACH2Q96NX9 599 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 ZNF670Q9BS34 389 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 EIF2AQ9BY44 585 aaKnown RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 ADNPQ9H2P0 1102 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 IGFLR1Q9H665 355 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 RGS18Q9NS28 235 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 RAD54BQ9Y620 910 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 UBOX5O94941 541 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 ZNF7P17097 686 aaPredicted RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 GOT1P17174 413 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 RPL22P35268 128 aaKnown RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 HIRAP54198 1017 aaPredicted RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 PRKAA1Q13131 559 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 GALNTL6Q49A17 601 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 SH3D19Q5HYK7 790 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 CYB5D1Q6P9G0 228 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 PSTKQ8IV42 348 aaKnown RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 FIBCD1Q8N539 461 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 CPXM1Q96SM3 734 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 TBL1YQ9BQ87 522 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 CTNNAL1Q9UBT7 734 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 MYO1GB0I1T2 1018 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 TFE3P19532 575 aaPredicted RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 PSMB4P28070 264 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 SCTRP47872 440 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 AMPD2Q01433 879 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 GALNT4Q8N4A0 578 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 ZNF555Q8NEP9 628 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 CNDP1Q96KN2 507 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 TSPAN18Q96SJ8 248 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.72■□□□□ 0.112e-9■■■■■ 28.8
TIMP3-201ENST00000266085 ACTR8Q9H981 624 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 WRAP73Q9P2S5 460 aaPredicted RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 DNMT3LQ9UJW3 386 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 TMEM191CA6NGB0 347 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 CA12O43570 354 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 CRABP2P29373 138 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 PBLDP30039 288 aaPredicted RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 PSEN1P49768 467 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 CCDC149Q6ZUS6 474 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 PATL1Q86TB9 770 aaKnown RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 NTPCRQ9BSD7 190 aaKnown RBP15.72■□□□□ 0.11
TIMP3-201ENST00000266085 IL22Q9GZX6 179 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 ZCWPW1Q9H0M4 648 aa15.72■□□□□ 0.11
TIMP3-201ENST00000266085 XPO1O14980 1071 aaKnown RBP15.71■□□□□ 0.11
TIMP3-201ENST00000266085 TPST1O60507 370 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 NQO1P15559 274 aaKnown RBP15.71■□□□□ 0.11
TIMP3-201ENST00000266085 ATP4AP20648 1035 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 LCLAT1Q6UWP7 414 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 OTOAQ7RTW8 1153 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 TDRD5Q8NAT2 981 aaKnown RBP15.71■□□□□ 0.11
TIMP3-201ENST00000266085 GPR152Q8TDT2 470 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 ATXN2LQ8WWM7 1075 aaKnown RBP15.71■□□□□ 0.11
TIMP3-201ENST00000266085 BCAS3Q9H6U6 928 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 GIMAP4Q9NUV9 329 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 LRRC37A3O60309 1634 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 hCG_1818297A0A087WSY0 165 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 ITGAVP06756 1048 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 HOXB8P17481 243 aaPredicted RBP15.71■□□□□ 0.11
TIMP3-201ENST00000266085 KCNA4P22459 653 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 CTNNB1P35222 781 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 CAPRIN2Q6IMN6 1127 aaKnown RBP15.71■□□□□ 0.11
TIMP3-201ENST00000266085 TNIP2Q8NFZ5 429 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 C2orf49Q9BVC5 232 aaPredicted RBP15.71■□□□□ 0.11
TIMP3-201ENST00000266085 TCF7L2Q9NQB0 619 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 THAP1Q9NVV9 213 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 THG1LQ9NWX6 298 aaKnown RBP15.71■□□□□ 0.11
TIMP3-201ENST00000266085 M0R2N6 131 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 KPNA3O00505 521 aaPredicted RBP15.71■□□□□ 0.11
TIMP3-201ENST00000266085 MAP2K7O14733 419 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 CILPO75339 1184 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 PCDH8O95206 1070 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 ITGB6P18564 788 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 PLIN5Q00G26 463 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 MBTD1Q05BQ5 628 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 BCL2L1Q07817 233 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 CYLC2Q14093 348 aaPredicted RBP15.71■□□□□ 0.11
TIMP3-201ENST00000266085 NEPROQ6NW34 567 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 ARMC6Q6NXE6 501 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 TRIM48Q8IWZ4 208 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 DAW1Q8N136 415 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 ALLCQ8N6M5 410 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 USP6NLQ92738 828 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 UPF1Q92900 1129 aaKnown RBP eCLIP15.71■□□□□ 0.117e-7■■■□□ 17.4
TIMP3-201ENST00000266085 LHX5Q9H2C1 402 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms