RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CDKL2Q92772 493 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 CNBD2Q96M20 576 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 ADCYAP1R1P41586 468 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 MAGEA3P43357 314 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 ROR2Q01974 943 aaKnown RBP17.21■□□□□ 0.35
SQLE-201ENST00000265896 OSMRQ99650 979 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 ZNF670Q9BS34 389 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 ATXN3LQ9H3M9 355 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 SMARCAD1Q9H4L7 1026 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 ANLNQ9NQW6 1124 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 SETD4Q9NVD3 440 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 A0A096LPK6 155 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 A0A0A0MRY4 1105 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 F8W8V4 182 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 M0QYT0 321 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 TSPAN1O60635 241 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 GCATO75600 419 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 VCLP18206 1134 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 AOC1P19801 751 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 EDNRBP24530 442 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 IFRD2Q12894 506 aaPredicted RBP17.2■□□□□ 0.34
SQLE-201ENST00000265896 ACAP1Q15027 740 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 TMA16Q96EY4 203 aaKnown RBP17.2■□□□□ 0.34
SQLE-201ENST00000265896 SCYL1Q96KG9 808 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 SPATA13Q96N96 652 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 CDRT15Q96T59 188 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 SUDS3Q9H7L9 328 aaPredicted RBP17.2■□□□□ 0.34
SQLE-201ENST00000265896 COPS7BQ9H9Q2 264 aaPredicted RBP17.2■□□□□ 0.34
SQLE-201ENST00000265896 IARS2Q9NSE4 1012 aaKnown RBP17.2■□□□□ 0.34
SQLE-201ENST00000265896 SSX2IPQ9Y2D8 614 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 COX4I1P13073 169 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 HDCP19113 662 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 FGFR3P22607 806 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 RIOX2Q8IUF8 465 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 CCNYL1Q8N7R7 359 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 DDX18Q9NVP1 670 aaKnown RBP17.2■□□□□ 0.34
SQLE-201ENST00000265896 RGPD3A6NKT7 1758 aaPredicted RBP17.2■□□□□ 0.34
SQLE-201ENST00000265896 RGPD4Q7Z3J3 1758 aa17.2■□□□□ 0.34
SQLE-201ENST00000265896 HBP1O60381 514 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 GLRA3O75311 464 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 LGALS2P05162 132 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 TSHRP16473 764 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 PDSS2Q86YH6 399 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 RNF135Q8IUD6 432 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 RTP4Q96DX8 246 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 QKIQ96PU8 341 aaKnown RBP eCLIP17.19■□□□□ 0.344e-7■■■□□ 14.6
SQLE-201ENST00000265896 CAMKK2Q96RR4 588 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 SEMA6AQ9H2E6 1030 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 CRABP2P29373 138 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 NAGLUP54802 743 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 LIN52Q52LA3 116 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 TDRD5Q8NAT2 981 aaKnown RBP17.19■□□□□ 0.34
SQLE-201ENST00000265896 MCUQ8NE86 351 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.19■□□□□ 0.345e-10■■□□□ 12.4
SQLE-201ENST00000265896 EDEM1Q92611 657 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 CERS2Q96G23 380 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 UBE2OQ9C0C9 1292 aaKnown RBP17.19■□□□□ 0.34
SQLE-201ENST00000265896 KLHL4Q9C0H6 718 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 CYP3A43Q9HB55 503 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 ERAP1Q9NZ08 941 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 LCTP09848 1927 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 XRCC1P18887 633 aaPredicted RBP17.19■□□□□ 0.34
SQLE-201ENST00000265896 NIPAL4Q0D2K0 466 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 SEMA5AQ13591 1074 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 DPYSL2Q16555 572 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 MTHFD1LQ6UB35 978 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 KYAT3Q6YP21 454 aaKnown RBP17.19■□□□□ 0.34
SQLE-201ENST00000265896 TMEM110Q86TL2 294 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 PIGZQ86VD9 579 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 RNF139Q8WU17 664 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 SLC4A5Q9BY07 1137 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 TASP1Q9H6P5 420 aa17.19■□□□□ 0.34
SQLE-201ENST00000265896 C20orf96Q9NUD7 363 aaPredicted RBP17.19■□□□□ 0.34
SQLE-201ENST00000265896 ZNF195O14628 629 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 CSPG5O95196 566 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 TGFB3P10600 412 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 FOLH1Q04609 750 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 INCA1Q0VD86 236 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 KLF10Q13118 480 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 PDK3Q15120 406 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 LAYNQ6UX15 382 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 LENG1Q96BZ8 264 aaPredicted RBP17.18■□□□□ 0.34
SQLE-201ENST00000265896 RCN3Q96D15 328 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 APBA2Q99767 749 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 SLC4A7Q9Y6M7 1214 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 NEMP2A6NFY4 417 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 I6L893 689 aaPredicted RBP17.18■□□□□ 0.34
SQLE-201ENST00000265896 ZBTB24O43167 697 aaPredicted RBP17.18■□□□□ 0.34
SQLE-201ENST00000265896 MCF2P10911 925 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 TSPAN8P19075 237 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 GNL1P36915 607 aaPredicted RBP17.18■□□□□ 0.34
SQLE-201ENST00000265896 SERPINB9P50453 376 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 THOP1P52888 689 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 TLR1Q15399 786 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.18■□□□□ 0.34
SQLE-201ENST00000265896 C6orf52Q5T4I8 152 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 SLC7A14Q8TBB6 771 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 PPP2R3CQ969Q6 453 aa17.18■□□□□ 0.34
SQLE-201ENST00000265896 NPAS2Q99743 824 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms