RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CHRNB1P11230 501 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 EIF2DP41214 584 aaKnown RBP18.89■□□□□ 0.61
SDF4-201ENST00000263741 NAP1L1P55209 391 aaKnown RBP18.89■□□□□ 0.61
SDF4-201ENST00000263741 RNF43Q68DV7 783 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 PKN3Q6P5Z2 889 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 KIF18AQ8NI77 898 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 FBXO10Q9UK96 956 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 MRPS17Q9Y2R5 130 aaKnown RBP18.89■□□□□ 0.61
SDF4-201ENST00000263741 SIT1Q9Y3P8 196 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 IGLV3-10A0A075B6K4 115 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 A0A0A6YYK5 440 aaPredicted RBP18.88■□□□□ 0.61
SDF4-201ENST00000263741 TBC1D3BA6NDS4 549 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.88■□□□□ 0.61
SDF4-201ENST00000263741 K7EQS6 105 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 LMAN2Q12907 356 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 MPP7Q5T2T1 576 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 EMC10Q5UCC4 262 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 CXorf57Q6NSI4 855 aaKnown RBP18.88■□□□□ 0.61
SDF4-201ENST00000263741 TMEM105Q8N8V8 129 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 TPCN2Q8NHX9 752 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 SORCS1Q8WY21 1168 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 LMAN1LQ9HAT1 526 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 NDFIP2Q9NV92 336 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 POLR3BQ9NW08 1133 aaPredicted RBP18.88■□□□□ 0.61
SDF4-201ENST00000263741 SHROOM3Q8TF72 1996 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 RNF40O75150 1001 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 COMTP21964 271 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 MAN1A1P33908 653 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 KIF5AQ12840 1032 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 SEMA3BQ13214 749 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 C5orf22Q49AR2 442 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 TMEM215Q68D42 235 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 C1orf228Q6PIY5 440 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 TBC1D31Q96DN5 1066 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 ZYG11BQ9C0D3 744 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 TMEM51Q9NW97 253 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 GGA2Q9UJY4 613 aa18.88■□□□□ 0.61
SDF4-201ENST00000263741 MOCS3O95396 460 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 GOT1P17174 413 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 AOC1P19801 751 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 DRD1P21728 446 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 L1CAMP32004 1257 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 GRIA2P42262 883 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 ARHGAP25P42331 645 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 AIF1P55008 147 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 HADHBP55084 474 aaKnown RBP18.87■□□□□ 0.61
SDF4-201ENST00000263741 FUT11Q495W5 492 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 C2orf27AQ580R0 203 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 TTC39BQ5VTQ0 682 aaPredicted RBP18.87■□□□□ 0.61
SDF4-201ENST00000263741 ANKS1BQ7Z6G8 1248 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 FBXL6Q8N531 539 aa18.87■□□□□ 0.61
SDF4-201ENST00000263741 DRGXA6NNA5 263 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 SPOPO43791 374 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 CD48P09326 243 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 CCDC175P0C221 793 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 PABPC1P11940 636 aaKnown RBP18.86■□□□□ 0.61
SDF4-201ENST00000263741 MZF1P28698 734 aaPredicted RBP18.86■□□□□ 0.61
SDF4-201ENST00000263741 EPHB2P29323 1055 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 CSKP41240 450 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 TPI1P60174 286 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 NRG1Q02297 640 aaPredicted RBP18.86■□□□□ 0.61
SDF4-201ENST00000263741 GAS6Q14393 721 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 FIBINQ8TAL6 211 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 ERLEC1Q96DZ1 483 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 LMLNQ96KR4 655 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 EPAS1Q99814 870 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 LZTFL1Q9NQ48 299 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 ZNF212Q9UDV6 495 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 DNAI1Q9UI46 699 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 INTS6Q9UL03 887 aaKnown RBP18.86■□□□□ 0.61
SDF4-201ENST00000263741 HCN2Q9UL51 889 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 CAPN6Q9Y6Q1 641 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 EEF2KO00418 725 aaKnown RBP18.86■□□□□ 0.61
SDF4-201ENST00000263741 MARCKSL1P49006 195 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 CDH4P55283 916 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 HADHQ16836 314 aaKnown RBP18.86■□□□□ 0.61
SDF4-201ENST00000263741 CHST9Q7L1S5 443 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 DAAM2Q86T65 1068 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 APCDD1Q8J025 514 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 NETO2Q8NC67 525 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 NCAPGQ9BPX3 1015 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 SLC2A11Q9BYW1 496 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 IRX2Q9BZI1 471 aaPredicted RBP18.86■□□□□ 0.61
SDF4-201ENST00000263741 CIPCQ9C0C6 399 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 C2orf42Q9NWW7 574 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 SLC27A6Q9Y2P4 619 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 ALG6Q9Y672 507 aa18.86■□□□□ 0.61
SDF4-201ENST00000263741 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.85■□□□□ 0.61
SDF4-201ENST00000263741 GRID2IPA4D2P6 1211 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 USP27XA6NNY8 438 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 BTNL10A8MVZ5 291 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 CLDN11O75508 207 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 TIE1P35590 1138 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 ZNF177Q13360 481 aaPredicted RBP18.85■□□□□ 0.61
SDF4-201ENST00000263741 TMEM31Q5JXX7 168 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 ZFYVE27Q5T4F4 411 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 EGFLAMQ63HQ2 1017 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 RPLP0P6Q8NHW5 317 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 CYB5D2Q8WUJ1 264 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 CWC15Q9P013 229 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms