RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 RBAK-RBAKDNI3L0D1 243 aa11.58□□□□□ -0.55
PTPN4-201ENST00000263708 CD3EAPO15446 510 aaKnown RBP11.58□□□□□ -0.55
PTPN4-201ENST00000263708 BST2Q10589 180 aaKnown RBP11.58□□□□□ -0.55
PTPN4-201ENST00000263708 ABRAXAS1Q6UWZ7 409 aa11.58□□□□□ -0.55
PTPN4-201ENST00000263708 STK32CQ86UX6 486 aa11.58□□□□□ -0.55
PTPN4-201ENST00000263708 REEP1Q9H902 201 aa11.58□□□□□ -0.55
PTPN4-201ENST00000263708 ACAD10Q6JQN1 1059 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ULK2Q8IYT8 1036 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ARRDC4Q8NCT1 418 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 KLHL32Q96NJ5 620 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 CCDC115Q96NT0 180 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 UBQLN1Q9UMX0 589 aaKnown RBP11.58□□□□□ -0.56
PTPN4-201ENST00000263708 F8VZ95 297 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ZNF208O43345 1280 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 NFKB1P19838 968 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 POU5F1Q01860 360 aaKnown RBP11.58□□□□□ -0.56
PTPN4-201ENST00000263708 NFIAQ12857 509 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 DCTN2Q13561 401 aaKnown RBP11.58□□□□□ -0.56
PTPN4-201ENST00000263708 PDK2Q15119 407 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ZBTB14O43829 449 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 BGNP21810 368 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ABCG4Q9H172 646 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 SEMA6AQ9H2E6 1030 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 IGFALSP35858 605 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ACLYP53396 1101 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 HSF2Q03933 536 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 CYP2A13Q16696 494 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 USP41Q3LFD5 358 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 BOLA3Q53S33 107 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 PPM1LQ5SGD2 360 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ZNF280DQ6N043 979 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 DHFR2Q86XF0 187 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 FAM126BQ8IXS8 530 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 KYQ8NBH2 561 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 FRMD8Q9BZ67 464 aaPredicted RBP11.58□□□□□ -0.56
PTPN4-201ENST00000263708 FAM192AQ9GZU8 254 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 CLN6Q9NWW5 311 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 MYL9P24844 172 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 KIAA1324Q6UXG2 1013 aaKnown RBP11.58□□□□□ -0.56
PTPN4-201ENST00000263708 CELF6Q96J87 481 aaKnown RBP11.58□□□□□ -0.56
PTPN4-201ENST00000263708 DHRS1Q96LJ7 313 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 SLC38A2Q96QD8 506 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 PTGFRNQ9P2B2 879 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 LRCH1Q9Y2L9 728 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 MYMKA6NI61 221 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 KCNH1O95259 989 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 JCHAINP01591 159 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 PDIA5Q14554 519 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 LLGL2Q6P1M3 1020 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ZSWIM2Q8NEG5 633 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 OR5T3Q8NGG3 340 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 PGLYRP2Q96PD5 576 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ZIM3Q96PE6 472 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 OGDHLQ9ULD0 1010 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ZNRF3Q9ULT6 936 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 RPS6KA4O75676 772 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 ALDH2P05091 517 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 GIMD1P0DJR0 217 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 CYP2C8P10632 490 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 FMO4P31512 558 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 GTF2A2P52657 109 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 MPP3Q13368 585 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 CELF1Q92879 486 aaKnown RBP11.58□□□□□ -0.56
PTPN4-201ENST00000263708 STARD7Q9NQZ5 370 aa11.58□□□□□ -0.56
PTPN4-201ENST00000263708 IGSF6O95976 241 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 NQO1P15559 274 aaKnown RBP11.57□□□□□ -0.56
PTPN4-201ENST00000263708 MAGEE2Q8TD90 523 aaPredicted RBP11.57□□□□□ -0.56
PTPN4-201ENST00000263708 CXorf40AQ8TE69 158 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 ATG4AQ8WYN0 398 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 SPON1Q9HCB6 807 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 FLT1P17948 1338 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 O00370 1275 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 GRIN3BO60391 1043 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 RASA1P20936 1047 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 CYP2F1P24903 491 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 SWI5Q1ZZU3 235 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 KCTD21Q4G0X4 260 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 RASGRP2Q7LDG7 609 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 GDPD5Q8WTR4 605 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 CEP41Q9BYV8 373 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 EPB41L1Q9H4G0 881 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 ATAD3AQ9NVI7 634 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 GPATCH2LQ9NWQ4 482 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 TBC1D3BA6NDS4 549 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 SLCO1B7G3V0H7 640 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 RTN3O95197 1032 aaPredicted RBP11.57□□□□□ -0.56
PTPN4-201ENST00000263708 SERPINA3P01011 423 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 RPS6KA3P51812 740 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 SLC45A4Q5BKX6 768 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 FAR1Q8WVX9 515 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 EDEM1Q92611 657 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 TUBE1Q9UJT0 475 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 ALG6Q9Y672 507 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 WRBO00258 174 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 BTN3A1O00481 513 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 XYLBO75191 536 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 TPGS1Q6ZTW0 290 aa11.57□□□□□ -0.56
PTPN4-201ENST00000263708 SRBD1Q8N5C6 995 aaKnown RBP11.57□□□□□ -0.56
PTPN4-201ENST00000263708 RAD51AP1Q96B01 352 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms