RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 HTR3CQ8WXA8 447 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 ZNF75CPQ92670 426 aaPredicted RBP17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 TAAR1Q96RJ0 339 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 IL22Q9GZX6 179 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 VTNP04004 478 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 PBLDP30039 288 aaPredicted RBP17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 GRIK3Q13003 919 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 ATG4CQ96DT6 458 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 CNTNAP4Q9C0A0 1308 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 RGS14O43566 566 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 HOXC6P09630 235 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 CSNK2BP67870 215 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 NLNQ9BYT8 704 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 NRDE2Q9H7Z3 1164 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 OR1E1P30953 314 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 TTKP33981 857 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 C2CD6Q53TS8 623 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 SPPL2AQ8TCT8 520 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 SORCS3Q9UPU3 1222 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 RAMP2O60895 175 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 CYP2B6P20813 491 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 ELK3P41970 407 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 ALDH9A1P49189 494 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 CCT3P49368 545 aaKnown RBP17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 GPR15P49685 360 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 RHOAP61586 193 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 CBWD3Q5JTY5 395 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 CBWD5Q5RIA9 395 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 MAGEC3Q8TD91 643 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 LACRTQ9GZZ8 138 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 MAPRE3Q9UPY8 281 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 EPN2O95208 641 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 CKBP12277 381 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 FCGRTP55899 365 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 STARD3Q14849 445 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 NEDD8Q15843 81 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 LZTR1Q8N653 840 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 APOL2Q9BQE5 337 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 MID1IP1Q9NPA3 183 aa17.8■□□□□ 0.44
NOTCH3-201ENST00000263388 NTSR2O95665 410 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 GLT6D1Q7Z4J2 308 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 VN1R5Q7Z5H4 357 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 STK40Q8N2I9 435 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 PROX1Q92786 737 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 HS6ST1O60243 411 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 RAG1P15918 1043 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 TKTL1P51854 596 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 CDK16Q00536 496 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 FAM117BQ6P1L5 589 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 CCDC33Q8N5R6 958 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 TAS1R2Q8TE23 839 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 TMEM159Q96B96 161 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 ARHGAP20Q9P2F6 1191 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 PRKAG3Q9UGI9 489 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 LIMD1Q9UGP4 676 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 C15orf41Q9Y2V0 281 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 CLOCKO15516 846 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 LRPAP1P30533 357 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 POLR2LP62875 67 aaKnown RBP17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 PUDPQ08623 228 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 ATP1A4Q13733 1029 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 GNA13Q14344 377 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 AADATQ8N5Z0 425 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 ITFG1Q8TB96 612 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 WDR27A2RRH5 827 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 NDUFB5O43674 189 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 ZNF7P17097 686 aaPredicted RBP17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 CAP2P40123 477 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 AMPD2Q01433 879 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 UXS1Q8NBZ7 420 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 UBP1Q9NZI7 540 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 KANSL3Q9P2N6 904 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 CBX4O00257 560 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 MFN2O95140 757 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 RTN3O95197 1032 aaPredicted RBP17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 MYL6P60660 151 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 ILDR2Q71H61 639 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 NECAB2Q7Z6G3 386 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 ASTN2O75129 1339 aaPredicted RBP17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 URODP06132 367 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 SCNN1BP51168 640 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 STX12Q86Y82 276 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 TMEM237Q96Q45 408 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 RAB21Q9UL25 225 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 NEK3P51956 506 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 RNF145Q96MT1 663 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 TSPAN16Q9UKR8 245 aa17.79■□□□□ 0.44
NOTCH3-201ENST00000263388 PPIDQ08752 370 aaKnown RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 MSLNQ13421 630 aaPredicted RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 ZNF268Q14587 947 aaPredicted RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 CTXN3Q4LDR2 81 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 SEZ6Q53EL9 994 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 TTC27Q6P3X3 843 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 FBXL16Q8N461 479 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 NFKBIZQ9BYH8 718 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 PAIP1Q9H074 479 aaKnown RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 ING3Q9NXR8 418 aa17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 RECQL5O94762 991 aaPredicted RBP17.78■□□□□ 0.44
NOTCH3-201ENST00000263388 MICAL2O94851 1124 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms