RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 LEFTY2O00292 366 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 ETS1P14921 441 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 RBL1P28749 1068 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 TNFRSF8P28908 595 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 STIP1P31948 543 aaKnown RBP23.32■■□□□ 1.32
UFD1-201ENST00000263202 PDK1Q15118 436 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 POTEHQ6S545 545 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 HTR3DQ70Z44 454 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 DDX42Q86XP3 938 aaKnown RBP eCLIP23.32■■□□□ 1.32
UFD1-201ENST00000263202 LZTR1Q8N653 840 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 FAM71DQ8N9W8 422 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 ING5Q8WYH8 240 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 ZNF212Q9UDV6 495 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 ZMYM5Q9UJ78 669 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 LSM7Q9UK45 103 aaKnown RBP23.32■■□□□ 1.32
UFD1-201ENST00000263202 DRG2P55039 364 aaKnown RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 GALNT2Q10471 571 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 ANKRD54Q6NXT1 300 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 CCNI2Q6ZMN8 369 aaPredicted RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 CIR1Q86X95 450 aaPredicted RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 ARHGAP12Q8IWW6 846 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 TFB1MQ8WVM0 346 aaKnown RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 CELF6Q96J87 481 aaKnown RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 ZSWIM3Q96MP5 696 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 PRICKLE1Q96MT3 831 aaPredicted RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 LGMNQ99538 433 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 DDX50Q9BQ39 737 aaKnown RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 ASIC3Q9UHC3 531 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 CCL26Q9Y258 94 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 SH3BP1Q9Y3L3 701 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 TMEM265A0A087WTH1 108 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 CFAP69A5D8W1 941 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 SCAMP3O14828 347 aaKnown RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 PPP1R12AO14974 1030 aaPredicted RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 NCAM2O15394 837 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 ZSCAN5DPP0CG00 497 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 RPL21P46778 160 aaKnown RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 CARSP49589 748 aaKnown RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 ADAM15Q13444 863 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 PRKD1Q15139 912 aaPredicted RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 AFMIDQ63HM1 303 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 SYCE2Q6PIF2 218 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 TFAP2DQ7Z6R9 452 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 GPR149Q86SP6 731 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 CFAP52Q8N1V2 620 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 ANKRD7Q92527 254 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 USP13Q92995 863 aaPredicted RBP23.31■■□□□ 1.32
UFD1-201ENST00000263202 APOL5Q9BWW9 433 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 PCDH9Q9HC56 1237 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 SNX24Q9Y343 169 aa23.31■■□□□ 1.32
UFD1-201ENST00000263202 TRDMT1O14717 391 aaKnown RBP23.3■■□□□ 1.32
UFD1-201ENST00000263202 KCNN4O15554 427 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 IFNB1P01574 187 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 MYBL2P10244 700 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 H2AFXP16104 143 aaPredicted RBP23.3■■□□□ 1.32
UFD1-201ENST00000263202 RABGAP1LQ5R372 815 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 FAM217AQ8IXS0 508 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 CCDC89Q8N998 374 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 TTC16Q8NEE8 873 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 SH3RF2Q8TEC5 729 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 IFT81Q8WYA0 676 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 RTP4Q96DX8 246 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 FAM114A2Q9NRY5 505 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 TDP1Q9NUW8 608 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 ZNF510Q9Y2H8 683 aa23.3■■□□□ 1.32
UFD1-201ENST00000263202 ZFP37Q9Y6Q3 630 aaPredicted RBP23.3■■□□□ 1.32
UFD1-201ENST00000263202 VAV1P15498 845 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 MX2P20592 715 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 IVDP26440 423 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 VPS41P49754 854 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 SGSHP51688 502 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 NRLP54845 237 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 CBX2Q14781 532 aaPredicted RBP23.29■■□□□ 1.32
UFD1-201ENST00000263202 GRIN2CQ14957 1233 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 UMODL1-AS1Q8N2C9 162 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 CCNYQ8ND76 341 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 CCHCR1Q8TD31 782 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 HDAC11Q96DB2 347 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 SLC39A8Q9C0K1 460 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 NOL6Q9H6R4 1146 aaKnown RBP23.29■■□□□ 1.32
UFD1-201ENST00000263202 DONSONQ9NYP3 566 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 CHD5Q8TDI0 1954 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 TSPAN3O60637 253 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 PRAMEF12O95522 483 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 GARSP41250 739 aaKnown RBP23.29■■□□□ 1.32
UFD1-201ENST00000263202 RPS24P62847 133 aaKnown RBP23.29■■□□□ 1.32
UFD1-201ENST00000263202 AP1B1Q10567 949 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 CUL1Q13616 776 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 BRD3Q15059 726 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 BRD8Q9H0E9 1235 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 RETREG1Q9H6L5 497 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 GRHL1Q9NZI5 618 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 MTCH2Q9Y6C9 303 aa23.29■■□□□ 1.32
UFD1-201ENST00000263202 E2F8A0AVK6 867 aa23.28■■□□□ 1.32
UFD1-201ENST00000263202 CCDC151A5D8V7 595 aa23.28■■□□□ 1.32
UFD1-201ENST00000263202 GFRA2O00451 464 aa23.28■■□□□ 1.32
UFD1-201ENST00000263202 NDST2P52849 883 aa23.28■■□□□ 1.32
UFD1-201ENST00000263202 PPIDQ08752 370 aaKnown RBP23.28■■□□□ 1.32
UFD1-201ENST00000263202 HEATR6Q6AI08 1181 aaKnown RBP23.28■■□□□ 1.32
UFD1-201ENST00000263202 FBXO38Q6PIJ6 1188 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms