RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 BOLA3Q53S33 107 aa19.3■□□□□ 0.68
CYSTM1-201ENST00000261811 C14orf80Q86SX3 495 aa19.3■□□□□ 0.68
CYSTM1-201ENST00000261811 SETD3Q86TU7 594 aaPredicted RBP19.3■□□□□ 0.68
CYSTM1-201ENST00000261811 CCDC112Q8NEF3 446 aa19.3■□□□□ 0.68
CYSTM1-201ENST00000261811 CALR3Q96L12 384 aaKnown RBP19.3■□□□□ 0.68
CYSTM1-201ENST00000261811 TRIM7Q9C029 511 aa19.3■□□□□ 0.68
CYSTM1-201ENST00000261811 RAB6CQ9H0N0 254 aa19.3■□□□□ 0.68
CYSTM1-201ENST00000261811 CATSPERBQ9H7T0 1116 aa19.3■□□□□ 0.68
CYSTM1-201ENST00000261811 MMP17Q9ULZ9 603 aa19.3■□□□□ 0.68
CYSTM1-201ENST00000261811 AP4E1Q9UPM8 1137 aa19.3■□□□□ 0.68
CYSTM1-201ENST00000261811 CHD5Q8TDI0 1954 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 I6L893 689 aaPredicted RBP19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 LRCH4O75427 683 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 PAPSS2O95340 614 aaPredicted RBP19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 OR1E1P30953 314 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 CD70P32970 193 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 NNMTP40261 264 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 PTPN5P54829 565 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 ST8SIA6P61647 398 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 MESP2Q0VG99 397 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 LMAN2Q12907 356 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 RNF219Q5W0B1 726 aaPredicted RBP19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 MBLAC2Q68D91 279 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 KIAA0907Q7Z7F0 614 aaPredicted RBP19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 CAMKK1Q8N5S9 505 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 ALLCQ8N6M5 410 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 IL17RCQ8NAC3 791 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 TXNDC5Q8NBS9 432 aaKnown RBP19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 MYEOVQ96EZ4 313 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 P2RY11Q96G91 374 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 FAM126AQ9BYI3 521 aaPredicted RBP19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 DHX35Q9H5Z1 703 aaKnown RBP19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 POLMQ9NP87 494 aaPredicted RBP19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 SNX10Q9Y5X0 201 aa19.29■□□□□ 0.68
CYSTM1-201ENST00000261811 NUP205Q92621 2012 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 CREB3O43889 395 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 ALDH1A2O94788 518 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 PROSCO94903 275 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 RHOCP08134 193 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 RHOQP17081 205 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 ETFBP38117 255 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 NOP2P46087 812 aaKnown RBP19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 DGKEP52429 567 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 CSTF1Q05048 431 aaKnown RBP19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 GAS6Q14393 721 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 ZNF528Q3MIS6 628 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 EMC10Q5UCC4 262 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 ZNF783Q6ZMS7 281 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 CIR1Q86X95 450 aaPredicted RBP19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 ZNF683Q8IZ20 524 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 CCDC33Q8N5R6 958 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 MUC3BQ9H195 1237 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 PRMT8Q9NR22 394 aaPredicted RBP19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 MPP6Q9NZW5 540 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 TBC1D30Q9Y2I9 924 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 FANCMQ8IYD8 2048 aa19.28■□□□□ 0.68
CYSTM1-201ENST00000261811 FGF10O15520 208 aaPredicted RBP19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 DAPK3O43293 454 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 MTA2O94776 668 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 LRIG2O94898 1065 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 DLDP09622 509 aaKnown RBP19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 EPHB2P29323 1055 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 MAN1A1P33908 653 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 MAPKAPK2P49137 400 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 PLK1P53350 603 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 TPI1P60174 286 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 MESDQ14696 234 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 STARD3Q14849 445 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 TCEAL1Q15170 157 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 PLEKHG6Q3KR16 790 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 FSCBQ5H9T9 825 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 PITRM1Q5JRX3 1037 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 EGFLAMQ63HQ2 1017 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 KIAA1328Q86T90 577 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 ADIPOR2Q86V24 386 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 SFTPA1Q8IWL2 248 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 WFDC5Q8TCV5 224 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 TEKT4Q8WW24 435 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 BTBD6Q96KE9 485 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 SNRNP25Q9BV90 132 aaKnown RBP19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 ZWILCHQ9H900 591 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 OSGEPQ9NPF4 335 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 THAP10Q9P2Z0 257 aaPredicted RBP19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 VPS28Q9UK41 221 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 CKAP5Q14008 2032 aa19.27■□□□□ 0.68
CYSTM1-201ENST00000261811 A0A0A6YYK5 440 aaPredicted RBP19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 EEF2KO00418 725 aaKnown RBP19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 CNTN5O94779 1100 aa19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 SRPRAP08240 638 aaKnown RBP19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 KRT7P08729 469 aa19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 HOXB2P14652 356 aa19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 ARL4AP40617 200 aa19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 CSKP41240 450 aa19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 SATB1Q01826 763 aa19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 CRY1Q16526 586 aa19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 FNDC3BQ53EP0 1204 aaKnown RBP19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 ALFQ53S48 1182 aa19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 MANEALQ5VSG8 457 aa19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 ZC3H14Q6PJT7 736 aaKnown RBP19.26■□□□□ 0.67
CYSTM1-201ENST00000261811 SERPINA13PQ6UXR4 307 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms