RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 A0A0A0MRY4 1105 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 SMTNL1A8MU46 457 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 EML2O95834 649 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 CLTBP09497 229 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 CEBPBP17676 345 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 RBL1P28749 1068 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 MAN1A1P33908 653 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 HSPA9P38646 679 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 DPP6P42658 865 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 MLLT6P55198 1093 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 POLD3Q15054 466 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 CCDC122Q5T0U0 273 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 STEAP4Q687X5 459 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 RFWD3Q6PCD5 774 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 GPR155Q7Z3F1 870 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 TMEM135Q86UB9 458 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 CNGA4Q8IV77 575 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 CCDC13Q8IYE1 715 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 FBXO22Q8NEZ5 403 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 MAPK15Q8TD08 544 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 PLEKHG4BQ96PX9 1271 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 GINS2Q9Y248 185 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 ALPK2Q86TB3 2170 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 DNAH9Q9NYC9 4486 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 K7ESM1 405 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 AXIN1O15169 862 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 YY2O15391 372 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 HYAL3O43820 417 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 GPR37L1O60883 481 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 AMPD1P23109 780 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 ADRA1BP35368 520 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 COPAP53621 1224 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 DRG2P55039 364 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 VCPP55072 806 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 NSUN2Q08J23 767 aaKnown RBP eCLIP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 CCDC150Q8NCX0 1101 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 FLVCR1-AS1Q8TAF5 88 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 CLDN16Q9Y5I7 305 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 RRN3P2A6NIE6 340 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 PENKP01210 267 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 CD70P32970 193 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 PCK1P35558 622 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 NRG1Q02297 640 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 KLHL30Q0D2K2 578 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 RALGDSQ12967 914 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 AUHQ13825 339 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 UGT3A2Q3SY77 523 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 TRIM68Q6AZZ1 485 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 ADNP2Q6IQ32 1131 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 SPOCD1Q6ZMY3 1216 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 USP37Q86T82 979 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 ZFYVE19Q96K21 471 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 MYADMQ96S97 322 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 TMEM245Q9H330 911 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 TBC1D30Q9Y2I9 924 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 BICDL2A1A5D9 508 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 TULP1O00294 542 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 MAP3K13O43283 966 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 COL9A1P20849 921 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 MCM3P25205 808 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 ZNF76P36508 570 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 YWHAZP63104 245 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 RAB33AQ14088 237 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 GEN1Q17RS7 908 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 TMEM25Q86YD3 366 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 OR52K1Q8NGK4 314 aa5.83□□□□□ -1.48
TOPBP1-201ENST00000260810 CLASP2O75122 1294 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 GNRH1P01148 92 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 FUT11Q495W5 492 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 ANKRD20A8PQ5CZ79 823 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 ATXN7L2Q5T6C5 722 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 GDPD5Q8WTR4 605 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 RUFY1Q96T51 708 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 USP18Q9UMW8 372 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 PCDHB8Q9UN66 801 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 PCDHGB4Q9UN71 923 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 PCDHGB5Q9Y5G0 923 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 A0A1W2PNU3 283 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 TRDMT1O14717 391 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 ZBTB24O43167 697 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 CAND2O75155 1236 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 B3GALT4O96024 378 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 HLA-DQB2P05538 268 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 RABGAP1LQ5R372 815 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 JAMLQ86YT9 394 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 CCDC112Q8NEF3 446 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 PSMG2Q969U7 264 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 ABHD8Q96I13 439 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 FERMT1Q9BQL6 677 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 APOL6Q9BWW8 343 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 ACTL8Q9H568 366 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 B3GAT3O94766 335 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 SUN1O94901 812 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 FGGP02679 453 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 NCAM1P13591 858 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 PTPN3P26045 913 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 MTIF2P46199 727 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 BNC1Q01954 994 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 SLC1A5Q15758 541 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 SLC44A4Q53GD3 710 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms