RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ZNF846Q147U1 533 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 GPR162Q16538 588 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 ECM1Q16610 540 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 CNPY1Q3B7I2 92 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 NECAB2Q7Z6G3 386 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 LINC00523Q86TU6 105 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 PIWIL2Q8TC59 973 aaKnown RBP9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 CLK4Q9HAZ1 481 aaKnown RBP9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 SYTL2Q9HCH5 934 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 TRMT6Q9UJA5 497 aaKnown RBP9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 PMF1-BGLAPU3KQ54 211 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 ANKRD63C9JTQ0 380 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZBTB24O43167 697 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 LYPLA1O75608 230 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 NAMPTP43490 491 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 TMC7Q7Z402 723 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 TCAIMQ8N3R3 496 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 SUN5Q8TC36 379 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 ART4Q93070 314 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 C19orf60Q96EN9 201 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZNF518BQ9C0D4 1074 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 WDCPQ9H6R7 721 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 RMND5AQ9H871 391 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 DNAAF2Q9NVR5 837 aaKnown RBP9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 ADAM30Q9UKF2 790 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 ASTN1O14525 1302 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 KRT87PA6NCN2 255 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 CCDC154A6NI56 674 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 CTSHP09668 335 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 VDRP11473 427 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 MUTP22033 750 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 TTKP33981 857 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 TWF1Q12792 350 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 MYBPC2Q14324 1141 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 MTX3Q5HYI7 312 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 KCNV1Q6PIU1 500 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 FAM47BQ8NA70 645 aa9.94□□□□□ -0.82
CTDSPL2-201ENST00000260327 MPOP05164 745 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 MZF1P28698 734 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CDH8P55286 799 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CYP4F2P78329 520 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CYP4F3Q08477 520 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 NR6A1Q15406 480 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZNF276Q8N554 614 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 SPOCK2Q92563 424 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 POMKQ9H5K3 350 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ELP3Q9H9T3 547 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 VANGL2Q9ULK5 521 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CCDC182A6NF36 153 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 HNRNPH3P31942 346 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 GRK3P35626 688 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 RGS4P49798 205 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 SLFN11Q7Z7L1 901 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 RBM46Q8TBY0 533 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 SPPL2AQ8TCT8 520 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ALG3Q92685 438 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZBTB45Q96K62 511 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 UBE2OQ9C0C9 1292 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 IKZF4Q9H2S9 585 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 TIMMDC1Q9NPL8 285 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 VTI1BQ9UEU0 232 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 TMCC3Q9ULS5 477 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CCNT2O60583 730 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 KATNA1O75449 491 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 MLNP12872 115 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 SLC2A4P14672 509 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ERCC2P18074 760 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 KRT20P35900 424 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CHI3L1P36222 383 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CENPAP49450 140 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 SEPHS1P49903 392 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CDC16Q13042 620 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 RTL3Q8N8U3 475 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 TMEM176AQ96HP8 235 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 TINF2Q9BSI4 451 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 FICDQ9BVA6 458 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 KLHL1Q9NR64 748 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 SLC17A7Q9P2U7 560 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZNF222Q9UK12 451 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 EDF1O60869 148 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 S100A9P06702 114 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ADSSP30520 456 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CDK7P50613 346 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 PTPN11Q06124 597 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 KHDC1Q4VXA5 237 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 MICALL2Q8IY33 904 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 WDR36Q8NI36 951 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 GMCL1Q96IK5 515 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 S100A14Q9HCY8 104 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 MID1IP1Q9NPA3 183 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ANAPC2Q9UJX6 822 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 MRPL42Q9Y6G3 142 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 C2CD2LO14523 706 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 LSM8O95777 96 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 FESP07332 822 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 NR4A1P22736 598 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 POU6F1Q14863 301 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 PRMT9Q6P2P2 845 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 GALNT18Q6P9A2 607 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms