RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 BHMTQ93088 406 aa16.05■□□□□ 0.16
GYPC-201ENST00000259254 FAM118BQ9BPY3 351 aa16.05■□□□□ 0.16
GYPC-201ENST00000259254 KXD1Q9BQD3 176 aa16.05■□□□□ 0.16
GYPC-201ENST00000259254 MUTYHQ9UIF7 546 aa16.05■□□□□ 0.16
GYPC-201ENST00000259254 NEU3Q9UQ49 428 aa16.05■□□□□ 0.16
GYPC-201ENST00000259254 MFHAS1Q9Y4C4 1052 aa16.05■□□□□ 0.16
GYPC-201ENST00000259254 IGLV3-10A0A075B6K4 115 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 CTAGE15A4D2H0 777 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 APOC4-APOC2K7ER74 178 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 DCLK1O15075 740 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 APOC2P02655 101 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 CTAGE8P0CG41 777 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 SERPINB6P35237 376 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 SGSHP51688 502 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 GBE1Q04446 702 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 C2orf54Q08AI8 447 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 KLF1Q13351 362 aaPredicted RBP16.04■□□□□ 0.16
GYPC-201ENST00000259254 PARM1Q6UWI2 310 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 MTSS1LQ765P7 747 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 CTAGE6Q86UF2 777 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 CTAGE4Q8IX94 777 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 PLD5Q8N7P1 536 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 RTL3Q8N8U3 475 aaKnown RBP16.04■□□□□ 0.16
GYPC-201ENST00000259254 C1orf54Q8WWF1 131 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 ATG4AQ8WYN0 398 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 OTUB2Q96DC9 234 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 LRRC3BQ96PB8 259 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 LINC00597Q9H2U6 94 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 L2HGDHQ9H9P8 463 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 DONSONQ9NYP3 566 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 EPS15L1Q9UBC2 864 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 SAE1Q9UBE0 346 aaPredicted RBP16.04■□□□□ 0.16
GYPC-201ENST00000259254 RAPGEFL1Q9UHV5 662 aa16.04■□□□□ 0.16
GYPC-201ENST00000259254 R3HDM2Q9Y2K5 976 aaKnown RBP16.04■□□□□ 0.16
GYPC-201ENST00000259254 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.03■□□□□ 0.16
GYPC-201ENST00000259254 A0A1B0GVM2 712 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 TCAF2A6NFQ2 919 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 PRR33A8MZF0 331 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 MFSD11O43934 449 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 CLDN11O75508 207 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 MAP3K6O95382 1288 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 PECAM1P16284 738 aaPredicted RBP16.03■□□□□ 0.16
GYPC-201ENST00000259254 CDH4P55283 916 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 OTUD4Q01804 1114 aaKnown RBP16.03■□□□□ 0.16
GYPC-201ENST00000259254 ZNF177Q13360 481 aaPredicted RBP16.03■□□□□ 0.16
GYPC-201ENST00000259254 SNX1Q13596 522 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 GRM2Q14416 872 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 PAFAH1B3Q15102 231 aaKnown RBP16.03■□□□□ 0.16
GYPC-201ENST00000259254 ANO4Q32M45 955 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 C5orf22Q49AR2 442 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 VITQ6UXI7 678 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 KLHL7Q8IXQ5 586 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 CARNMT1Q8N4J0 409 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 CCDC33Q8N5R6 958 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 KIAA1958Q8N8K9 716 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 SPATA4Q8NEY3 305 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 ACTL9Q8TC94 416 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 OSCP1Q8WVF1 389 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 ELSPBP1Q96BH3 223 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 CELF6Q96J87 481 aaKnown RBP16.03■□□□□ 0.16
GYPC-201ENST00000259254 HOMER3Q9NSC5 361 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 TMEM248Q9NWD8 314 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 NR2E1Q9Y466 385 aa16.03■□□□□ 0.16
GYPC-201ENST00000259254 WASH4PA8MWX3 477 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 H0Y626 953 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 H7C0C1 242 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 DFFAO00273 331 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 MCF2LO15068 1137 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 ECI2O75521 394 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 RHOCP08134 193 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 OR1E1P30953 314 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 ATP5OP48047 213 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 MAPKAPK2P49137 400 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 EIF3EP60228 445 aaKnown RBP16.02■□□□□ 0.16
GYPC-201ENST00000259254 PDGFRLQ15198 375 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 SIX1Q15475 284 aaPredicted RBP16.02■□□□□ 0.16
GYPC-201ENST00000259254 C6orf118Q5T5N4 469 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 TRIM68Q6AZZ1 485 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 BZW1Q7L1Q6 419 aaKnown RBP16.02■□□□□ 0.16
GYPC-201ENST00000259254 CHST9Q7L1S5 443 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 NLRP14Q86W24 1093 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 ZNF354CQ86Y25 554 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 TMEM25Q86YD3 366 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 MFSD6LQ8IWD5 586 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 ZDHHC14Q8IZN3 488 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 LZTR1Q8N653 840 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 NPWQ8N729 165 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 PRELID2Q8N945 189 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 NETO2Q8NC67 525 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 DEPDC1BQ8WUY9 529 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 FGF14Q92915 247 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 IRF7Q92985 503 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 MAGOHBQ96A72 148 aaKnown RBP16.02■□□□□ 0.16
GYPC-201ENST00000259254 ZFYVE19Q96K21 471 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 BBS2Q9BXC9 721 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 SPHK2Q9NRA0 654 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 RBM12Q9NTZ6 932 aaKnown RBP16.02■□□□□ 0.16
GYPC-201ENST00000259254 PLK2Q9NYY3 685 aa16.02■□□□□ 0.16
GYPC-201ENST00000259254 NUMBLQ9Y6R0 609 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms