RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PTPN3P26045 913 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 RPL10AP62906 217 aaKnown RBP28.4■■■□□ 2.14
CCM2-201ENST00000258781 COG7P83436 770 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 USP41Q3LFD5 358 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 ADGRD1Q6QNK2 874 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 TBC1D31Q96DN5 1066 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 SLC39A13Q96H72 371 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 TMEM169Q96HH4 297 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 PAFAH2Q99487 392 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 LBHD1Q9BQE6 289 aaPredicted RBP28.4■■■□□ 2.14
CCM2-201ENST00000258781 SIK2Q9H0K1 926 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 OLA1Q9NTK5 396 aaKnown RBP28.4■■■□□ 2.14
CCM2-201ENST00000258781 ZC3H7BQ9UGR2 993 aaKnown RBP28.4■■■□□ 2.14
CCM2-201ENST00000258781 TCRBV9S1A1TA0A576 114 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 HNRNPH2P55795 449 aaKnown RBP28.4■■■□□ 2.14
CCM2-201ENST00000258781 MGAT5BQ3V5L5 792 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 FCRL2Q96LA5 508 aaPredicted RBP28.4■■■□□ 2.14
CCM2-201ENST00000258781 SIGLEC10Q96LC7 697 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 CCT8L2Q96SF2 557 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 VAT1Q99536 393 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 RABEP2Q9H5N1 569 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 CATSPERBQ9H7T0 1116 aa28.4■■■□□ 2.14
CCM2-201ENST00000258781 CPP00450 1065 aa28.39■■■□□ 2.14
CCM2-201ENST00000258781 EFTUD2Q15029 972 aaKnown RBP eCLIP28.39■■■□□ 2.14
CCM2-201ENST00000258781 RWDD4Q6NW29 188 aaKnown RBP28.39■■■□□ 2.14
CCM2-201ENST00000258781 LZTR1Q8N653 840 aa28.39■■■□□ 2.14
CCM2-201ENST00000258781 SEPT5Q99719 369 aaPredicted RBP28.39■■■□□ 2.14
CCM2-201ENST00000258781 CRISPLD1Q9H336 500 aa28.39■■■□□ 2.14
CCM2-201ENST00000258781 TLR8Q9NR97 1041 aaKnown RBP28.39■■■□□ 2.14
CCM2-201ENST00000258781 KLHL8Q9P2G9 620 aaPredicted RBP28.39■■■□□ 2.14
CCM2-201ENST00000258781 MTRRQ9UBK8 725 aa28.39■■■□□ 2.14
CCM2-201ENST00000258781 NUDT5Q9UKK9 219 aa28.39■■■□□ 2.14
CCM2-201ENST00000258781 TRHDEQ9UKU6 1024 aa28.39■■■□□ 2.14
CCM2-201ENST00000258781 SLC27A5Q9Y2P5 690 aa28.39■■■□□ 2.14
CCM2-201ENST00000258781 INSL6Q9Y581 213 aa28.39■■■□□ 2.14
CCM2-201ENST00000258781 LCHNA4D1U4 455 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 FOXO6A8MYZ6 492 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 SOD2P04179 222 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 SRGAP2BP0DMP2 458 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 PSMB4P28070 264 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 MSH2P43246 934 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 CFAP36Q96G28 342 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 C1orf74Q96LT6 269 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 CEP295NLQ96MC4 621 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 KCNK9Q9NPC2 374 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 PLXNA4Q9HCM2 1894 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 KCNK1O00180 336 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 TRDMT1O14717 391 aaKnown RBP28.38■■■□□ 2.13
CCM2-201ENST00000258781 SOAT2O75908 522 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 KRT15P19012 456 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 SLC8B1Q6J4K2 584 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 LRRC8BQ6P9F7 803 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 PID1Q7Z2X4 250 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 FIBCD1Q8N539 461 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 ZNF473Q8WTR7 871 aaKnown RBP28.38■■■□□ 2.13
CCM2-201ENST00000258781 DCAKDQ8WVC6 231 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 EBNA1BP2Q99848 306 aaKnown RBP28.38■■■□□ 2.13
CCM2-201ENST00000258781 CEP41Q9BYV8 373 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.38■■■□□ 2.13
CCM2-201ENST00000258781 SPG21Q9NZD8 308 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 TTLL3Q9Y4R7 772 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 BACE2Q9Y5Z0 518 aa28.38■■■□□ 2.13
CCM2-201ENST00000258781 CHD9Q3L8U1 2897 aa28.37■■■□□ 2.13
CCM2-201ENST00000258781 C2CD2LO14523 706 aa28.37■■■□□ 2.13
CCM2-201ENST00000258781 ADAM12O43184 909 aa28.37■■■□□ 2.13
CCM2-201ENST00000258781 TBX4P57082 545 aa28.37■■■□□ 2.13
CCM2-201ENST00000258781 ARTNQ5T4W7 220 aa28.37■■■□□ 2.13
CCM2-201ENST00000258781 FOXR1Q6PIV2 292 aa28.37■■■□□ 2.13
CCM2-201ENST00000258781 PDCD7Q8N8D1 485 aaKnown RBP28.37■■■□□ 2.13
CCM2-201ENST00000258781 FBXO22Q8NEZ5 403 aa28.37■■■□□ 2.13
CCM2-201ENST00000258781 GPR152Q8TDT2 470 aa28.37■■■□□ 2.13
CCM2-201ENST00000258781 TRABDQ9H4I3 376 aa28.37■■■□□ 2.13
CCM2-201ENST00000258781 CDY1Q9Y6F8 540 aa28.37■■■□□ 2.13
CCM2-201ENST00000258781 RPL17P18621 184 aaKnown RBP28.36■■■□□ 2.13
CCM2-201ENST00000258781 RASIP1Q5U651 963 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 TSGA13Q96PP4 275 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 RAD9AQ99638 391 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 HS3ST4Q9Y661 456 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 GBF1Q92538 1859 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 CCT5P48643 541 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 SLC18A1P54219 525 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 MLLT6P55198 1093 aaPredicted RBP28.36■■■□□ 2.13
CCM2-201ENST00000258781 TAF10Q12962 218 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 DUSP4Q13115 394 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 PSMD5Q16401 504 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 C9orf50Q5SZB4 431 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 ITPRIPL1Q6GPH6 555 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 PHOSPHO2Q8TCD6 241 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 SP7Q8TDD2 431 aaPredicted RBP28.36■■■□□ 2.13
CCM2-201ENST00000258781 SLC44A1Q8WWI5 657 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 CLP1Q92989 425 aaKnown RBP28.36■■■□□ 2.13
CCM2-201ENST00000258781 CHMP6Q96FZ7 201 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 NKIRAS1Q9NYS0 192 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 FNIP2Q9P278 1114 aa28.36■■■□□ 2.13
CCM2-201ENST00000258781 E9PAM4 449 aa28.35■■■□□ 2.13
CCM2-201ENST00000258781 PRPF4O43172 522 aaKnown RBP eCLIP28.35■■■□□ 2.131e-6■■□□□ 13.8
CCM2-201ENST00000258781 TLL1O43897 1013 aa28.35■■■□□ 2.13
CCM2-201ENST00000258781 PRKCHP24723 683 aa28.35■■■□□ 2.13
CCM2-201ENST00000258781 GRIA1P42261 906 aa28.35■■■□□ 2.13
CCM2-201ENST00000258781 TRIP4Q15650 581 aaPredicted RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms