RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 IRGMA1A4Y4 181 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 BTNL10A8MVZ5 291 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 H3BNX3 289 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 OGTO15294 1046 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 AHCYL1O43865 530 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 MFN2O95140 757 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 CD44P16070 742 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 YWHAQP27348 245 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 PTDSS1P48651 473 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 MFSD4BQ5TF39 518 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF549Q6P9A3 640 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF571Q7Z3V5 609 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 FBXO39Q8N4B4 442 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 DDX18Q9NVP1 670 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 PCDHA3Q9Y5H8 950 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 SQORQ9Y6N5 450 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 NCANO14594 1321 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 LRG1P02750 347 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 NR3C2P08235 984 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 HMBSP08397 361 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ABHD2P08910 425 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 HOXB8P17481 243 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 POU1F1P28069 291 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 FAM187BQ17R55 369 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 INO80DQ53TQ3 878 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ARCQ7LC44 396 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 TCP10LQ8TDR4 215 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 SEMA6BQ9H3T3 888 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 TLR8Q9NR97 1041 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 TUBA8Q9NY65 449 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 PCYOX1Q9UHG3 505 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ZNRF3Q9ULT6 936 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 COMMD3-BMI1R4GMX3 469 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 H3BMM5 538 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 S100A9P06702 114 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 RASA1P20936 1047 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 AKAP5P24588 427 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ELF3P78545 371 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 TYW3Q6IPR3 259 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 STYK1Q6J9G0 422 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 KLHL24Q6TFL4 600 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 BNIPLQ7Z465 357 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 NT5DC3Q86UY8 548 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 AHI1Q8N157 1196 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 B3GALNT2Q8NCR0 500 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF668Q96K58 619 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 NUDT12Q9BQG2 462 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 MUC13Q9H3R2 512 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 EPB41L4AQ9HCS5 686 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 CISHQ9NSE2 258 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 NUDT5Q9UKK9 219 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 UBQLN1Q9UMX0 589 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 TNPO3Q9Y5L0 923 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 TDRD15B5MCY1 1934 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 SSNA1O43805 119 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 PAEPP09466 180 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ALOX5P09917 674 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 PRKAR1AP10644 381 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ATP6V1C1P21283 382 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 PAICSP22234 425 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 NPY2RP49146 381 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ALDH7A1P49419 539 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 BCAP31P51572 246 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 FCHO2Q0JRZ9 810 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 NT5DC4Q86YG4 428 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ARHGEF19Q8IW93 802 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 IZUMO1Q8IYV9 350 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 SMARCD1Q96GM5 515 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 GORASP1Q9BQQ3 440 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 OSBPL6Q9BZF3 934 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 MID1IP1Q9NPA3 183 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 RPL26L1Q9UNX3 145 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 GSTK1Q9Y2Q3 226 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 PCDHGC5Q9Y5F6 944 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 GMEB1Q9Y692 573 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 COL3A1P02461 1466 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 LINC00854A0A1B0GVQ3 168 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 CYB561D2O14569 222 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ZW10O43264 779 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 RPL21P46778 160 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 SLC26A2P50443 739 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ATP12AP54707 1039 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 SPIRE1Q08AE8 756 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 BAATQ14032 418 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF284Q2VY69 593 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 WDR48Q8TAF3 677 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 UCMAQ8WVF2 138 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 SPIRE2Q8WWL2 714 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 PRCCQ92733 491 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 ACSF2Q96CM8 615 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 PGM2Q96G03 612 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 TMEM176AQ96HP8 235 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 CCDC28BQ9BUN5 200 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 SPAG4Q9NPE6 437 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 A1CFQ9NQ94 594 aaKnown RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 EHD3Q9NZN3 535 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 CHORDC1Q9UHD1 332 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-201ENST00000258349 C4AP0C0L4 1744 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 C4BP0C0L5 1744 aa4.89□□□□□ -1.63
RC3H1-201ENST00000258349 FOCADQ5VW36 1801 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms