RNA–Protein interactions for RNA: ENST00000255152.2

ZSWIM3-201, Transcript of zinc finger SWIM-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZSWIM3, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3-201ENST00000255152 TUBA1BP68363 451 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 MS4A2Q01362 244 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 RAB39AQ14964 217 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 SPCS2Q15005 226 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 PIGGQ5H8A4 983 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 FAM47CQ5HY64 1035 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 RFPL4BQ6ZWI9 263 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 TUBA1AQ71U36 451 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 FBXO11Q86XK2 927 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 RCOR2Q8IZ40 523 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 PDPRQ8NCN5 879 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 TNIP2Q8NFZ5 429 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 SUN5Q8TC36 379 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 APBB2Q92870 758 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 CRNNQ9UBG3 495 aaPredicted RBP13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 AFG3L2Q9Y4W6 797 aa13.31□□□□□ -0.28
ZSWIM3-201ENST00000255152 AIM2O14862 343 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 TIMM44O43615 452 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 LYPLA1O75608 230 aaPredicted RBP13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 BCAS2O75934 225 aaPredicted RBP13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 CLPXO76031 633 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 BCL10O95999 233 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 CCNA2P20248 432 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 MAP4P27816 1152 aaKnown RBP13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 MSX2P35548 267 aaPredicted RBP13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 NUDT2P50583 147 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 KLF10Q13118 480 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 TTC33Q6PID6 262 aaPredicted RBP13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 GADL1Q6ZQY3 521 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 MAVSQ7Z434 540 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 HEATR4Q86WZ0 1026 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 ZC3H7AQ8IWR0 971 aaKnown RBP13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 ANKRD13AQ8IZ07 590 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 ZNF786Q8N393 782 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 UBR7Q8N806 425 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 DDX1Q92499 740 aaKnown RBP13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 ZNF347Q96SE7 839 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 CENPOQ9BU64 300 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 MARCH7Q9H992 704 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 RAB20Q9NX57 234 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 UBE4BO95155 1302 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 PI4K2BG5E9Z4 385 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 UBL4AP11441 157 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 RPL10P27635 214 aaKnown RBP13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 ZFYVE27Q5T4F4 411 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 TEDDM1Q5T9Z0 273 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 KYQ8NBH2 561 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 KLHL32Q96NJ5 620 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 NAA50Q9GZZ1 169 aaKnown RBP13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 USTQ9Y2C2 406 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 TRAF6Q9Y4K3 522 aa13.3□□□□□ -0.28
ZSWIM3-201ENST00000255152 HTRA2O43464 458 aaPredicted RBP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 ZC3H11AO75152 810 aaKnown RBP eCLIP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 RFPL1O75677 317 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 POLR2BP30876 1174 aaKnown RBP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 HOXA13P31271 388 aaPredicted RBP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 ELK3P41970 407 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 SLC1A6P48664 564 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 VAMP7P51809 220 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 NME3Q13232 169 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 TREML2Q5T2D2 321 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 PPP1R18Q6NYC8 613 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 STXBP4Q6ZWJ1 553 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 SLC9A9Q8IVB4 645 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 SLITRK1Q96PX8 696 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 WDR18Q9BV38 432 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 RNF38Q9H0F5 515 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 SEMA6AQ9H2E6 1030 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 RAVER2Q9HCJ3 691 aaKnown RBP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 KLHL11Q9NVR0 708 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 FBXO9Q9UK97 447 aaPredicted RBP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 CROCCQ5TZA2 2017 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 WDR90Q96KV7 1748 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 TRIM64A6NGJ6 449 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 A6NL46 340 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 TEX28O15482 410 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 MSI1O43347 362 aaKnown RBP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 JRKO75564 520 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 ME2P23368 584 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 CRHR1P34998 444 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 ACADSBP45954 432 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 PRAMEP78395 509 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 SPIRE1Q08AE8 756 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 GRSF1Q12849 480 aaKnown RBP eCLIP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 ZNF846Q147U1 533 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 FASTKD1Q53R41 847 aaKnown RBP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 PERM1Q5SV97 790 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 LDHDQ86WU2 507 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 IGDCC3Q8IVU1 814 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 CTAGE3PQ8IX95 158 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 DSELQ8IZU8 1212 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 PPM1NQ8N819 430 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 ATG4CQ96DT6 458 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 ZNF486Q96H40 463 aaPredicted RBP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 SPATA17Q96L03 361 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 AMNQ9BXJ7 453 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 HOXD1Q9GZZ0 328 aa13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 TP63Q9H3D4 680 aaPredicted RBP13.29□□□□□ -0.28
ZSWIM3-201ENST00000255152 XPO7Q9UIA9 1087 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms