RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 HECTD3Q5T447 861 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 TRMT11Q7Z4G4 463 aaKnown RBP19.34■□□□□ 0.69
PTPRE-201ENST00000254667 KYQ8NBH2 561 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 B3GALNT2Q8NCR0 500 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 FAM120BQ96EK7 910 aaKnown RBP19.34■□□□□ 0.69
PTPRE-201ENST00000254667 DPY30Q9C005 99 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 PDP2Q9P2J9 529 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 MAP3K13O43283 966 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 DAB1O75553 588 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 ALADP13716 330 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 NOMO2Q5JPE7 1267 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 KAT5Q92993 513 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 C1QTNF7Q9BXJ2 289 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 DERAQ9Y315 318 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 STAU1O95793 577 aaKnown RBP19.34■□□□□ 0.69
PTPRE-201ENST00000254667 ZNF844Q08AG5 666 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 ZNF662Q6ZS27 426 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 MTSS1LQ765P7 747 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 CHST7Q9NS84 486 aa19.34■□□□□ 0.69
PTPRE-201ENST00000254667 CPSF4O95639 269 aaKnown RBP19.33■□□□□ 0.69
PTPRE-201ENST00000254667 DARSP14868 501 aaKnown RBP19.33■□□□□ 0.69
PTPRE-201ENST00000254667 TRMT5Q32P41 509 aaKnown RBP19.33■□□□□ 0.69
PTPRE-201ENST00000254667 USP45Q70EL2 814 aa19.33■□□□□ 0.69
PTPRE-201ENST00000254667 KLRG1Q96E93 195 aa19.33■□□□□ 0.69
PTPRE-201ENST00000254667 PRRG3Q9BZD7 231 aa19.33■□□□□ 0.69
PTPRE-201ENST00000254667 CACNA2D2Q9NY47 1150 aa19.33■□□□□ 0.69
PTPRE-201ENST00000254667 DNMT3LQ9UJW3 386 aa19.33■□□□□ 0.69
PTPRE-201ENST00000254667 SLC2A4P14672 509 aa19.33■□□□□ 0.69
PTPRE-201ENST00000254667 POLR2EP19388 210 aaKnown RBP19.33■□□□□ 0.69
PTPRE-201ENST00000254667 PCID2Q5JVF3 399 aa19.33■□□□□ 0.69
PTPRE-201ENST00000254667 APLFQ8IW19 511 aaPredicted RBP19.33■□□□□ 0.69
PTPRE-201ENST00000254667 MICU2Q8IYU8 434 aa19.33■□□□□ 0.69
PTPRE-201ENST00000254667 SERAC1Q96JX3 654 aa19.33■□□□□ 0.69
PTPRE-201ENST00000254667 C3P01024 1663 aa19.33■□□□□ 0.69
PTPRE-201ENST00000254667 ZNF862O60290 1169 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 BMP10O95393 424 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 SPATA31C1P0DKV0 1188 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 IMPDH2P12268 514 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 FAM183BPQ6ZVS7 135 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 KDM4FA0A1W2PPD8 638 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 MAGEA13PA6NCF6 341 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 KATNA1O75449 491 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 PLIN5Q00G26 463 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 MFSD4BQ5TF39 518 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 POLNQ7Z5Q5 900 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 IL31RAQ8NI17 732 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 CCDC3Q9BQI4 270 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 NCKAP1Q9Y2A7 1128 aa19.33■□□□□ 0.68
PTPRE-201ENST00000254667 NME5P56597 212 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 METTL3Q86U44 580 aaKnown RBP19.32■□□□□ 0.68
PTPRE-201ENST00000254667 PHF21BQ96EK2 531 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 SNX13Q9Y5W8 968 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 CSH1P0DML2 217 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 CSH2P0DML3 217 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 PPP2R1BP30154 601 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 NOGQ13253 232 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 SYTL1Q8IYJ3 562 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 GLIS3Q8NEA6 775 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 TBC1D23Q9NUY8 699 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 PADI4Q9UM07 663 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 LOC102724159A0A0B4J2E5 919 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 PWP2Q15269 919 aaKnown RBP19.32■□□□□ 0.68
PTPRE-201ENST00000254667 STARD8Q92502 1023 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 PPP1R16AQ96I34 528 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 ZNF670Q9BS34 389 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 CAAP1Q9H8G2 361 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 GJB6O95452 261 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 DEFA1P59665 94 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 DEFA3P59666 94 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 CHADLQ6NUI6 762 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 TMEM199Q8N511 208 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 PPTC7Q8NI37 304 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 PCYOX1Q9UHG3 505 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 E7ENQ6 273 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 TNFRSF8P28908 595 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 MARSP56192 900 aaKnown RBP19.32■□□□□ 0.68
PTPRE-201ENST00000254667 ACOX1Q15067 660 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 DCLRE1AQ6PJP8 1040 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 PIGZQ86VD9 579 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 TMPRSS6Q8IU80 811 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 TOP6BLQ8N6T0 577 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 COMMD8Q9NX08 183 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 NDUFA13Q9P0J0 144 aa19.32■□□□□ 0.68
PTPRE-201ENST00000254667 RASSF9O75901 435 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 BAIAP3O94812 1187 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 GRIK3Q13003 919 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 IL17AQ16552 155 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 TMCO1Q9UM00 188 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 TNPO3Q9Y5L0 923 aaKnown RBP19.31■□□□□ 0.68
PTPRE-201ENST00000254667 TRAV19A0A0A6YYK7 116 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 TRPM4Q8TD43 1214 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 MFSD14AQ96MC6 490 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 INPP4AQ96PE3 977 aaPredicted RBP19.31■□□□□ 0.68
PTPRE-201ENST00000254667 KCTD14Q9BQ13 255 aaPredicted RBP19.31■□□□□ 0.68
PTPRE-201ENST00000254667 CDHR5Q9HBB8 845 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 ADGRA3Q8IWK6 1321 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 PDZK1P1A8MUH7 402 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 ATP9AO75110 1047 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 NAA20P61599 178 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 LNX1Q8TBB1 728 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms