RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 KCNH7Q9NS40 1196 aa20.9■□□□□ 0.94
RARA-201ENST00000254066 RABL2AQ9UBK7 228 aaPredicted RBP20.9■□□□□ 0.94
RARA-201ENST00000254066 ITGB5P18084 799 aa20.9■□□□□ 0.94
RARA-201ENST00000254066 NEK2P51955 445 aa20.9■□□□□ 0.94
RARA-201ENST00000254066 SLC9B1Q4ZJI4 515 aa20.9■□□□□ 0.94
RARA-201ENST00000254066 THOC7Q6I9Y2 204 aaKnown RBP20.9■□□□□ 0.94
RARA-201ENST00000254066 EEPD1Q7L9B9 569 aa20.9■□□□□ 0.94
RARA-201ENST00000254066 CNTD1Q8N815 330 aa20.9■□□□□ 0.94
RARA-201ENST00000254066 SUCOQ9UBS9 1254 aaKnown RBP20.9■□□□□ 0.94
RARA-201ENST00000254066 TSC22D4Q9Y3Q8 395 aa20.9■□□□□ 0.94
RARA-201ENST00000254066 SIPA1L1O43166 1804 aa20.9■□□□□ 0.94
RARA-201ENST00000254066 KLRG2A4D1S0 409 aaPredicted RBP20.89■□□□□ 0.94
RARA-201ENST00000254066 H7C0C1 242 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 GIPC1O14908 333 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 SNAP91O60641 907 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 PRKCGP05129 697 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 UGT1A6P19224 532 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 TPSB2P20231 275 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 UGT1A1P22309 533 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 UGT1A4P22310 534 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 UGT1A3P35503 534 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 UGT1A5P35504 534 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 SERPINB5P36952 375 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 ATP5OP48047 213 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 TPSAB1Q15661 275 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 XKR9Q5GH70 373 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 STEAP4Q687X5 459 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 SNRNP48Q6IEG0 339 aaKnown RBP20.89■□□□□ 0.94
RARA-201ENST00000254066 SLC4A11Q8NBS3 891 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 CDKL2Q92772 493 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 DCUN1D5Q9BTE7 237 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 RNF181Q9P0P0 153 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 PACSIN3Q9UKS6 424 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 ERGIC3Q9Y282 383 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 PCDHAC2Q9Y5I4 1007 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 ARID2Q68CP9 1835 aa20.89■□□□□ 0.94
RARA-201ENST00000254066 BCLAF3A2AJT9 711 aaKnown RBP20.89■□□□□ 0.93
RARA-201ENST00000254066 WDR64B1ANS9 1081 aa20.89■□□□□ 0.93
RARA-201ENST00000254066 HTRA2O43464 458 aaPredicted RBP20.89■□□□□ 0.93
RARA-201ENST00000254066 XPOTO43592 962 aaKnown RBP20.89■□□□□ 0.93
RARA-201ENST00000254066 PTPN1P18031 435 aaKnown RBP20.89■□□□□ 0.93
RARA-201ENST00000254066 NRLP54845 237 aa20.89■□□□□ 0.93
RARA-201ENST00000254066 DCAF6Q58WW2 860 aa20.89■□□□□ 0.93
RARA-201ENST00000254066 NEPROQ6NW34 567 aa20.89■□□□□ 0.93
RARA-201ENST00000254066 PEX5LQ8IYB4 626 aa20.89■□□□□ 0.93
RARA-201ENST00000254066 PACRGLQ8N7B6 248 aa20.89■□□□□ 0.93
RARA-201ENST00000254066 KIFC3Q9BVG8 833 aa20.89■□□□□ 0.93
RARA-201ENST00000254066 CXorf21Q9HAI6 301 aa20.89■□□□□ 0.93
RARA-201ENST00000254066 TRNAU1APQ9NX07 287 aaKnown RBP20.89■□□□□ 0.93
RARA-201ENST00000254066 COL11A2P13942 1736 aaPredicted RBP20.88■□□□□ 0.93
RARA-201ENST00000254066 IQCA1LA6NCM1 817 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 H3BMQ9 156 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 TPP1O14773 563 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 ATE1O95260 518 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 HSPA4LO95757 839 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 RHDQ02161 417 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 ART3Q13508 389 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 ITGA7Q13683 1181 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 NHSL2Q5HYW2 709 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 ZNF362Q5T0B9 420 aaPredicted RBP20.88■□□□□ 0.93
RARA-201ENST00000254066 IL23RQ5VWK5 629 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 RSBN1LQ6PCB5 846 aaPredicted RBP20.88■□□□□ 0.93
RARA-201ENST00000254066 FRA10AC1Q70Z53 315 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 TTC30AQ86WT1 665 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 WDTC1Q8N5D0 677 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 GRIN3AQ8TCU5 1115 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 COG8Q96MW5 612 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 VPS33BQ9H267 617 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 ZNF385DQ9H6B1 395 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 TUT1Q9H6E5 874 aaKnown RBP20.88■□□□□ 0.93
RARA-201ENST00000254066 SEPT3Q9UH03 358 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 GIT1Q9Y2X7 761 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 STYXL1Q9Y6J8 313 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 CTBSQ01459 385 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 NSUN2Q08J23 767 aaKnown RBP eCLIP20.88■□□□□ 0.93
RARA-201ENST00000254066 NIPAL4Q0D2K0 466 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 TRAP1Q12931 704 aaKnown RBP20.88■□□□□ 0.93
RARA-201ENST00000254066 TBC1D10BQ4KMP7 808 aaPredicted RBP20.88■□□□□ 0.93
RARA-201ENST00000254066 PPP4R4Q6NUP7 873 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 SLC2A7Q6PXP3 512 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 ANKRD13BQ86YJ7 626 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 PDPRQ8NCN5 879 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 STARD8Q92502 1023 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 TFAP2CQ92754 450 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 EFHD1Q9BUP0 239 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 SBF1O95248 1867 aa20.88■□□□□ 0.93
RARA-201ENST00000254066 TRUB2O95900 331 aaKnown RBP20.87■□□□□ 0.93
RARA-201ENST00000254066 APRTP07741 180 aa20.87■□□□□ 0.93
RARA-201ENST00000254066 NPR1P16066 1061 aa20.87■□□□□ 0.93
RARA-201ENST00000254066 EIF2B2P49770 351 aaKnown RBP20.87■□□□□ 0.93
RARA-201ENST00000254066 PKNOX1P55347 436 aa20.87■□□□□ 0.93
RARA-201ENST00000254066 ZBTB17Q13105 803 aa20.87■□□□□ 0.93
RARA-201ENST00000254066 PPIL2Q13356 520 aa20.87■□□□□ 0.93
RARA-201ENST00000254066 ABCB5Q2M3G0 1257 aa20.87■□□□□ 0.93
RARA-201ENST00000254066 LMBRD2Q68DH5 695 aaPredicted RBP20.87■□□□□ 0.93
RARA-201ENST00000254066 GPAT2Q6NUI2 795 aa20.87■□□□□ 0.93
RARA-201ENST00000254066 NANOGNBQ7Z5D8 188 aa20.87■□□□□ 0.93
RARA-201ENST00000254066 RCN3Q96D15 328 aa20.87■□□□□ 0.93
RARA-201ENST00000254066 CALN1Q9BXU9 219 aa20.87■□□□□ 0.93
RARA-201ENST00000254066 AGO4Q9HCK5 861 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms