RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GJB7Q6PEY0 223 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 HHIPL2Q6UWX4 724 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZNF571Q7Z3V5 609 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 TXNRD3Q86VQ6 643 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 CHSY1Q86X52 802 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 TTC30BQ8N4P2 665 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 LRRC71Q8N4P6 559 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 WWOXQ9NZC7 414 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 TBX3O15119 743 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 CTDNEP1O95476 244 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 NDUFB10O96000 172 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 TPBGLP0DKB5 382 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 PAICSP22234 425 aaKnown RBP13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 KYAT1Q16773 422 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 C6orf183Q5T699 404 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 SLC5A5Q92911 643 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 RHOBTB2Q9BYZ6 727 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 PLOD3O60568 738 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 MT-CO1P00395 513 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 ACAT1P24752 427 aaKnown RBP13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 RPA3P35244 121 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 ELK3P41970 407 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 RAB27AP51159 221 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 BNIP1Q12981 228 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 DCAF4L1Q3SXM0 396 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 GALNT18Q6P9A2 607 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 MACC1Q6ZN28 852 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 GATAD2AQ86YP4 633 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 C2orf69Q8N8R5 385 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZNF540Q8NDQ6 660 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZNF671Q8TAW3 534 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 EFHD2Q96C19 240 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZNF560Q96MR9 790 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 BTBD9Q96Q07 612 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 AP5M1Q9H0R1 490 aa13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 STN1Q9H668 368 aaKnown RBP13.42□□□□□ -0.26
PCDHGA3-201ENST00000253812 HLA-DRAP01903 254 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 PAX3P23760 479 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 IL18R1Q13478 541 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZNF268Q14587 947 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 TAMM41Q96BW9 452 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 RAB26Q9ULW5 256 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 COX4I1P13073 169 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 AVPR1AP37288 418 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 RGS7P49802 495 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 ITGA7Q13683 1181 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 NR6A1Q15406 480 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 RFX4Q33E94 735 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 DDI2Q5TDH0 399 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 LDHDQ86WU2 507 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 APOBEC3FQ8IUX4 373 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 IQCKQ8N0W5 287 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 NSUN6Q8TEA1 469 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 KAT2BQ92831 832 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 PABPC5Q96DU9 382 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 APOL5Q9BWW9 433 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 GPR75-ASB3A0A0A6YYF3 556 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 ARPC4-TTLL3A0A0A6YYG9 625 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 FAM237BA0A1B0GVD1 139 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 RGSL1A5PLK6 1076 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 SSTR1P30872 391 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 HSF2Q03933 536 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 DPYSQ14117 519 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 PCSK7Q16549 785 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 C15orf59Q2T9L4 293 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 C16orf86Q6ZW13 317 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 PCDH20Q8N6Y1 951 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZSWIM2Q8NEG5 633 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 REEP1Q9H902 201 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 TMEM138Q9NPI0 162 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 GABBR1Q9UBS5 961 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 SLIT1O75093 1534 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 PSMD12O00232 456 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 PDE2AO00408 941 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 GSC2O15499 205 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 MMP13P45452 471 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 HMGCS2P54868 508 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 TTLL9Q3SXZ7 439 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 RBM20Q5T481 1227 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 MINDY2Q8NBR6 621 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 MAPRE3Q9UPY8 281 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 FER1L4A9Z1Z3 1794 aa13.41□□□□□ -0.26
PCDHGA3-201ENST00000253812 SHBGP04278 402 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 DRG2P55039 364 aaKnown RBP13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 EFR3AQ14156 821 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 PDK2Q15119 407 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 DEFB132Q7Z7B7 95 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 ACTL9Q8TC94 416 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZFAND2BQ8WV99 257 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 CCDC154A6NI56 674 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 SERPINA6P08185 405 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 SEPHS1P49903 392 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 CASP7P55210 303 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 PSME3P61289 254 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 MEA1Q16626 185 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 CNPY1Q3B7I2 92 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZIK1Q3SY52 487 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 CRTC3Q6UUV7 619 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 SPOCD1Q6ZMY3 1216 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZCCHC9Q8N567 271 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms