RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 CERCAMQ5T4B2 595 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 UNC93AQ86WB7 457 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 NT5DC4Q86YG4 428 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 MFSD3Q96ES6 412 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 VRTNQ9H8Y1 702 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 PPM1HQ9ULR3 514 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 ASB3Q9Y575 518 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 MAGEC1O60732 1142 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 ENO3P13929 434 aaPredicted RBP18.89■□□□□ 0.61
LRP3-201ENST00000253193 PTPN9P43378 593 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 RAB27AP51159 221 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 TBL3Q12788 808 aaKnown RBP18.89■□□□□ 0.61
LRP3-201ENST00000253193 CES4AQ5XG92 561 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 CWF19L1Q69YN2 538 aaKnown RBP18.89■□□□□ 0.61
LRP3-201ENST00000253193 NAT9Q9BTE0 207 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 VCX3BQ9H321 246 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 ADARB2Q9NS39 739 aaKnown RBP18.89■□□□□ 0.61
LRP3-201ENST00000253193 CDY2AQ9Y6F7 541 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 CDY1Q9Y6F8 540 aa18.89■□□□□ 0.61
LRP3-201ENST00000253193 PHGDHO43175 533 aaKnown RBP18.88■□□□□ 0.61
LRP3-201ENST00000253193 ERCC2P18074 760 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 NUMBP49757 651 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 PRAMEF19Q5SWL8 479 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 SYPL2Q5VXT5 272 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 LPCAT4Q643R3 524 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 LRRC8BQ6P9F7 803 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 EVPLQ92817 2033 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 CNMDO75829 334 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 PGGT1BP53609 377 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 POU5F1BQ06416 359 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 MPP3Q13368 585 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 ART3Q13508 389 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 RBBP5Q15291 538 aaKnown RBP18.88■□□□□ 0.61
LRP3-201ENST00000253193 MMEL1Q495T6 779 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 WSCD1Q658N2 575 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 CTU1Q7Z7A3 348 aaKnown RBP18.88■□□□□ 0.61
LRP3-201ENST00000253193 HPS6Q86YV9 775 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 TTC16Q8NEE8 873 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 COPG2Q9UBF2 871 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 SMIM28A0A1B0GU29 152 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 MED21Q13503 144 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 LBRQ14739 615 aaKnown RBP18.88■□□□□ 0.61
LRP3-201ENST00000253193 FAM187BQ17R55 369 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 HSF5Q4G112 596 aaPredicted RBP18.88■□□□□ 0.61
LRP3-201ENST00000253193 PAN2Q504Q3 1202 aaKnown RBP18.88■□□□□ 0.61
LRP3-201ENST00000253193 TEDDM1Q5T9Z0 273 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 B3GALNT2Q8NCR0 500 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
LRP3-201ENST00000253193 MYL3P08590 195 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 FAM200BP0CF97 657 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 ITKQ08881 620 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 PDCD2Q16342 344 aaPredicted RBP18.87■□□□□ 0.61
LRP3-201ENST00000253193 SLC25A52Q3SY17 297 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 SH2D5Q6ZV89 423 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 SPATA6LQ8N4H0 392 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 TDRD5Q8NAT2 981 aaKnown RBP18.87■□□□□ 0.61
LRP3-201ENST00000253193 PPTC7Q8NI37 304 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 APBA2Q99767 749 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 ULBP1Q9BZM6 244 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 FAM96AQ9H5X1 160 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 WDR55Q9H6Y2 383 aaPredicted RBP18.87■□□□□ 0.61
LRP3-201ENST00000253193 HACD1B0YJ81 288 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 USP17L7P0C7H9 530 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 SERPINB8P50452 374 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 SNAPC2Q13487 334 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 SV2CQ496J9 727 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 KHSRPQ92945 711 aaKnown RBP eCLIP18.87■□□□□ 0.61
LRP3-201ENST00000253193 KCNN1Q92952 543 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 MAF1Q9H063 256 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 ARHGAP26Q9UNA1 814 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 HMX2A2RU54 273 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 ZNF534Q76KX8 674 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 IPMKQ8NFU5 416 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 COG4Q9H9E3 785 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 SNX10Q9Y5X0 201 aa18.87■□□□□ 0.61
LRP3-201ENST00000253193 IDH3AP50213 366 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 RTP4Q96DX8 246 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 HSFY1Q96LI6 401 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 NFKBIZQ9BYH8 718 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 NUF2Q9BZD4 464 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 ILKAPQ9H0C8 392 aaPredicted RBP18.86■□□□□ 0.61
LRP3-201ENST00000253193 CHRAC1Q9NRG0 131 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 GTSE1Q9NYZ3 720 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 PHIPQ8WWQ0 1821 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 LRRC52Q8N7C0 313 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.86■□□□□ 0.61
LRP3-201ENST00000253193 MARK4Q96L34 752 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 CPNE1Q99829 537 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 SORBS2O94875 1100 aaKnown RBP18.86■□□□□ 0.61
LRP3-201ENST00000253193 MOCS2O96007 188 aaPredicted RBP18.86■□□□□ 0.61
LRP3-201ENST00000253193 NOS2P35228 1153 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 ACTR3P61158 418 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 GEN1Q17RS7 908 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 GRTP1Q5TC63 336 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 MBLAC2Q68D91 279 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 ZNF410Q86VK4 478 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 KCNMB4Q86W47 210 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 ST13P4Q8IZP2 240 aaPredicted RBP18.86■□□□□ 0.61
LRP3-201ENST00000253193 ZNF781Q8N8C0 355 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 ACMSDQ8TDX5 336 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms