RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SLC1A5Q15758 541 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ZYXQ15942 572 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SLC5A9Q2M3M2 681 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SPANXN3Q5MJ09 141 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PDPK2PQ6A1A2 396 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SCYL2Q6P3W7 929 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TIFABQ6ZNK6 161 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 FRA10AC1Q70Z53 315 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 RNF169Q8NCN4 708 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 RP9Q8TA86 221 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TTC8Q8TAM2 541 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 HSPH1Q92598 858 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SCYL1Q96KG9 808 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 CCT7Q99832 543 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF302Q9NR11 478 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 CISHQ9NSE2 258 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PKD2L2Q9NZM6 624 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 BLOC1S6Q9UL45 172 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PLA2G4CQ9UP65 541 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 A0A087WXM4 84 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PFDN6O15212 129 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 KCNN4O15554 427 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 BPGMP07738 259 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PABPC4LP0CB38 370 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 RFC1P35251 1148 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ELK3P41970 407 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TBL3Q12788 808 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 OVGP1Q12889 678 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 MSLNQ13421 630 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 AASDHQ4L235 1098 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ARMC3Q5W041 872 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 NXNQ6DKJ4 435 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 LCLAT1Q6UWP7 414 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 FASTKD5Q7L8L6 764 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 CEP70Q8NHQ1 597 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TOP1MTQ969P6 601 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TMEM143Q96AN5 459 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 MIPEPQ99797 713 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 CPNE1Q99829 537 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 OSBPL11Q9BXB4 747 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 EIF2AQ9BY44 585 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 POPDC2Q9HBU9 364 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PCMTD2Q9NV79 361 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 STAP1Q9ULZ2 295 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SF3B1O75533 1304 aaKnown RBP eCLIP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ANKRD33BA6NCL7 494 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 KBTBD13C9JR72 458 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TNPO2O14787 897 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GIPC1O14908 333 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 NCAM2O15394 837 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 AP1G2O75843 785 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 DGKIO75912 1065 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 WISP3O95389 354 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 IMPDH2P12268 514 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GP5P40197 560 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SLC1A6P48664 564 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ACOT2P49753 483 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SLC26A2P50443 739 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ABCE1P61221 599 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 STXBP2Q15833 593 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 MTERF2Q49AM1 385 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 KHDC1Q4VXA5 237 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 C2CD6Q53TS8 623 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 UBXN11Q5T124 520 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 FKBP9P1Q75LS8 142 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 MYLK4Q86YV6 388 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RBM12BQ8IXT5 1001 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 CPXCR1Q8N123 301 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 FAM172AQ8WUF8 416 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 FAM136AQ96C01 138 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TSPAN17Q96FV3 270 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 VPS39Q96JC1 886 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 VPS50Q96JG6 964 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ZMAT2Q96NC0 199 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GCNAQ96QF7 691 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SLC13A1Q9BZW2 595 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 VPS45Q9NRW7 570 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TAS2R1Q9NYW7 299 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 MOCS1Q9NZB8 636 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 DNAJC16Q9Y2G8 782 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TYW5A2RUC4 315 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 A8MUI8 341 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 INPPL1O15357 1258 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 CCNT2O60583 730 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 HMGCRP04035 888 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RALBP11234 206 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ETS1P14921 441 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PGAM1P18669 254 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ME2P23368 584 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RPL22P35268 128 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SERPINB10P48595 397 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TFAMQ00059 246 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 CDC42EP1Q00587 391 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 FAAP100Q0VG06 881 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TAF5Q15542 800 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ARL13BQ3SXY8 428 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF394Q53GI3 561 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ACSBG2Q5FVE4 666 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 FAM102AQ5T9C2 384 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ARHGAP17Q68EM7 881 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms