RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 TSPAN16Q9UKR8 245 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 AP4E1Q9UPM8 1137 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 ZFXP17010 805 aaPredicted RBP13.65□□□□□ -0.22
PEX1-201ENST00000248633 GNAZP19086 355 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 ETFBP38117 255 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 PSEN2P49810 448 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 AMIGO2Q86SJ2 522 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 UNC5BQ8IZJ1 945 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 SPATA6LQ8N4H0 392 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 FBXO27Q8NI29 283 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 NAT14Q8WUY8 206 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 ZNF516Q92618 1163 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 CPXM1Q96SM3 734 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 SPATA16Q9BXB7 569 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 RUVBL2Q9Y230 463 aaKnown RBP13.65□□□□□ -0.22
PEX1-201ENST00000248633 MOCS2O96007 188 aaPredicted RBP13.65□□□□□ -0.22
PEX1-201ENST00000248633 GJA5P36382 358 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 NAGLUP54802 743 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 DLG1Q12959 904 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 PCSK7Q16549 785 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 LRRC8BQ6P9F7 803 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 TDRPQ86YL5 185 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 IPMKQ8NFU5 416 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 SLCO2A1Q92959 643 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 ERLEC1Q96DZ1 483 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 ACO2Q99798 780 aaKnown RBP13.65□□□□□ -0.22
PEX1-201ENST00000248633 CCDC68Q9H2F9 335 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 CAB39LQ9H9S4 337 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 CCDC167Q9P0B6 97 aa13.65□□□□□ -0.22
PEX1-201ENST00000248633 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.64□□□□□ -0.23
PEX1-201ENST00000248633 CXorf49A8MYA2 514 aaPredicted RBP13.64□□□□□ -0.23
PEX1-201ENST00000248633 BPGMP07738 259 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 RPL5P46777 297 aaKnown RBP13.64□□□□□ -0.23
PEX1-201ENST00000248633 AGKQ53H12 422 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 SH3PXD2AQ5TCZ1 1133 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 UNC5AQ6ZN44 842 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 GPR141Q7Z602 305 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 TFAP2BQ92481 460 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 NKD2Q969F2 451 aaPredicted RBP13.64□□□□□ -0.23
PEX1-201ENST00000248633 LENG1Q96BZ8 264 aaPredicted RBP13.64□□□□□ -0.23
PEX1-201ENST00000248633 RCN3Q96D15 328 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 TMEM176AQ96HP8 235 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 VPS39Q96JC1 886 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 NTPCRQ9BSD7 190 aaKnown RBP13.64□□□□□ -0.23
PEX1-201ENST00000248633 CYLDQ9NQC7 956 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 DPP3Q9NY33 737 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 MYOCOSA0A1B0GUC4 107 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 SMPD1P17405 629 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 NSUN2Q08J23 767 aaKnown RBP eCLIP13.64□□□□□ -0.23
PEX1-201ENST00000248633 EEF1DP3Q658K8 133 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 ATP6V1E2Q96A05 226 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 ATXN10Q9UBB4 475 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 LNPEPQ9UIQ6 1025 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 SIGLEC16A6NMB1 481 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 SIN3BO75182 1162 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 EIF4BP23588 611 aaKnown RBP13.64□□□□□ -0.23
PEX1-201ENST00000248633 NDST1P52848 882 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 PDK1Q15118 436 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 LRRC38Q5VT99 294 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 CDH22Q9UJ99 828 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 UNCXA6NJT0 531 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 TYROBPO43914 113 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 PGK1P00558 417 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 IL10P22301 178 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 TPI1P60174 286 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 YWHAZP63104 245 aaKnown RBP13.64□□□□□ -0.23
PEX1-201ENST00000248633 OGDHQ02218 1023 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 GHRHRQ02643 423 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 DCTN2Q13561 401 aaKnown RBP13.64□□□□□ -0.23
PEX1-201ENST00000248633 DCAF4L1Q3SXM0 396 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 IGDCC3Q8IVU1 814 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 APBA2Q99767 749 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 FRMD8Q9BZ67 464 aaPredicted RBP13.64□□□□□ -0.23
PEX1-201ENST00000248633 PREBQ9HCU5 417 aa13.64□□□□□ -0.23
PEX1-201ENST00000248633 PIGNO95427 931 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 SMIM10L2AP0DMW4 78 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 SMIM10L2BP0DMW5 78 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 THPOP40225 353 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 KPNA2P52292 529 aaKnown RBP13.63□□□□□ -0.23
PEX1-201ENST00000248633 ABCE1P61221 599 aaKnown RBP13.63□□□□□ -0.23
PEX1-201ENST00000248633 KRT72Q14CN4 511 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 NEDD8Q15843 81 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 FUT11Q495W5 492 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 B3GNT9Q6UX72 402 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 DCAKDQ8WVC6 231 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 NRBF2Q96F24 287 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 DCUN1D1Q96GG9 259 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 LGMNQ99538 433 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 CYP1A1P04798 512 aaPredicted RBP13.63□□□□□ -0.23
PEX1-201ENST00000248633 MMP3P08254 477 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 CSH1P0DML2 217 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 CSH2P0DML3 217 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 TMED10P49755 219 aaKnown RBP13.63□□□□□ -0.23
PEX1-201ENST00000248633 C1orf220Q5T0J3 134 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 CXCL17Q6UXB2 119 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 RAB44Q7Z6P3 723 aaPredicted RBP13.63□□□□□ -0.23
PEX1-201ENST00000248633 METTL23Q86XA0 190 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 KIAA0319LQ8IZA0 1049 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 C12orf29Q8N999 325 aa13.63□□□□□ -0.23
PEX1-201ENST00000248633 DDI1Q8WTU0 396 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms