RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PANX3Q96QZ0 392 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 PPM1HQ9ULR3 514 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 SIN3BO75182 1162 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 TM7SF2O76062 418 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 BEST1O76090 585 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 CNTFP26441 200 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 NUDT2P50583 147 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 BEX3Q00994 111 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 DSG1Q02413 1049 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 PPIL2Q13356 520 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 PDCD2Q16342 344 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 SLC25A52Q3SY17 297 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 CXorf38Q8TB03 319 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 SHKBP1Q8TBC3 707 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 OXCT2Q9BYC2 517 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 WDR55Q9H6Y2 383 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 VTA1Q9NP79 307 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 DDX43Q9NXZ2 648 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 PLA2G4CQ9UP65 541 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 SORBS2O94875 1100 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 GSTA2P09210 222 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 ABCE1P61221 599 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 CACNB2Q08289 660 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 POU6F1Q14863 301 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 TEDDM1Q5T9Z0 273 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 ARCQ7LC44 396 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 ZNF410Q86VK4 478 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 LRRC52Q8N7C0 313 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 KCNK16Q96T55 309 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 APBA2Q99767 749 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 CHRAC1Q9NRG0 131 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 MTMR10Q9NXD2 777 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 MORF4L1Q9UBU8 362 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 NUDT5Q9UKK9 219 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 SCN1AP35498 2009 aa12.91□□□□□ -0.34
RAB3IP-201ENST00000247833 DNAJC25-GNG10A0A024R161 153 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 KLF11O14901 512 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 BIRC5O15392 142 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 MMP3P08254 477 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 NPR3P17342 541 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 NFKB1P19838 968 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 HOXA11P31270 313 aaPredicted RBP12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 IRF9Q00978 393 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 PRPSAP1Q14558 356 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 LPCAT4Q643R3 524 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 TAPT1Q6NXT6 567 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 LRRC8BQ6P9F7 803 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 SH2D5Q6ZV89 423 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 HPS6Q86YV9 775 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 WNT8BQ93098 351 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 CMTM5Q96DZ9 223 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 ANKRD27Q96NW4 1050 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 NFKBIZQ9BYH8 718 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 PLAC1Q9HBJ0 212 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 PIGVQ9NUD9 493 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 COPG2Q9UBF2 871 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 ZNF212Q9UDV6 495 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 RPL26L1Q9UNX3 145 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 FAM72CH0Y354 149 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 ZBTB24O43167 697 aaPredicted RBP12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 PMPCBO75439 489 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 SMIM10L2AP0DMW4 78 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 SMIM10L2BP0DMW5 78 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 GNAT1P11488 350 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 PTPN1P18031 435 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 NOS2P35228 1153 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 TBL3Q12788 808 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 FSCBQ5H9T9 825 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 FAM72AQ5TYM5 149 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 FAM72DQ6L9T8 149 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 KCNMB4Q86W47 210 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 FAM72BQ86X60 149 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 PLD6Q8N2A8 252 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 ZNF781Q8N8C0 355 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 TDRD5Q8NAT2 981 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 KCNN1Q92952 543 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 HSFY1Q96LI6 401 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 NUF2Q9BZD4 464 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 TLE6Q9H808 572 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 GTSE1Q9NYZ3 720 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 SSC5DA1L4H1 1573 aa12.9□□□□□ -0.34
RAB3IP-201ENST00000247833 CASTOR2A6NHX0 329 aa12.9□□□□□ -0.35
RAB3IP-201ENST00000247833 GRK2P25098 689 aa12.9□□□□□ -0.35
RAB3IP-201ENST00000247833 EPHA3P29320 983 aa12.9□□□□□ -0.35
RAB3IP-201ENST00000247833 SOX4Q06945 474 aaPredicted RBP12.9□□□□□ -0.35
RAB3IP-201ENST00000247833 PCSK7Q16549 785 aa12.9□□□□□ -0.35
RAB3IP-201ENST00000247833 IRGCQ6NXR0 463 aa12.9□□□□□ -0.35
RAB3IP-201ENST00000247833 USP13Q92995 863 aaPredicted RBP12.9□□□□□ -0.35
RAB3IP-201ENST00000247833 WDCPQ9H6R7 721 aa12.9□□□□□ -0.35
RAB3IP-201ENST00000247833 FZD10Q9ULW2 581 aa12.9□□□□□ -0.35
RAB3IP-201ENST00000247833 DOCK1Q14185 1865 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 SERPINB8P50452 374 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 GEN1Q17RS7 908 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 STRADAQ7RTN6 431 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 NET1Q7Z628 596 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 OSTM1Q86WC4 334 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 RTP4Q96DX8 246 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 FAXDC2Q96IV6 333 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 NAT9Q9BTE0 207 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms