RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 NME3Q13232 169 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 LBRQ14739 615 aaKnown RBP22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 SCUBE1Q8IWY4 988 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 SIX6OS1Q8N1H7 587 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 SLC9A7Q96T83 725 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 CPNE1Q99829 537 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 GRK2P25098 689 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 LRPAP1P30533 357 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 GARSP41250 739 aaKnown RBP22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 AIF1P55008 147 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 ROR2Q01974 943 aaKnown RBP22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 GRTP1Q5TC63 336 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 LRRC74BQ6ZQY2 392 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 PID1Q7Z2X4 250 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 TP53INP2Q8IXH6 220 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 ARRDC4Q8NCT1 418 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 NPLOC4Q8TAT6 608 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 ISL2Q96A47 359 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 ZNF212Q9UDV6 495 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 IPPQ9Y573 584 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 RAD54BQ9Y620 910 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 RPS6KL1Q9Y6S9 549 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 CCL15-CCL14A0A0B4J2E2 113 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 DPPA5A6NC42 116 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 ERVK-10P10266 1014 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 ACAT1P24752 427 aaKnown RBP22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 MLH1P40692 756 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 RPS6KA3P51812 740 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 UBAP2LQ14157 1087 aaKnown RBP22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 CCL15Q16663 113 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 RABGAP1LQ5R372 815 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 HFE2Q6ZVN8 426 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 SMG8Q8ND04 991 aaKnown RBP22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 NTAN1Q96AB6 310 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 GORASP1Q9BQQ3 440 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 PAPOLBQ9NRJ5 636 aaKnown RBP22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 TXNDC16Q9P2K2 825 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 ADAM28Q9UKQ2 775 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 FAM163BP0C2L3 166 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 PTPN3P26045 913 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 ADRA1BP35368 520 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 MAGEA12P43365 314 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 SEMA3BQ13214 749 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 MFSD10Q14728 455 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 TRMT5Q32P41 509 aaKnown RBP22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 PLEKHH3Q7Z736 793 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 C10orf107Q8IVU9 208 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 ULK2Q8IYT8 1036 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 RNF169Q8NCN4 708 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 ZFAND2BQ8WV99 257 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 FCRL3Q96P31 734 aaPredicted RBP22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 SORT1Q99523 831 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 FAM96AQ9H5X1 160 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 IL1RAPL1Q9NZN1 696 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 KLHL8Q9P2G9 620 aaPredicted RBP22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 COPG2Q9UBF2 871 aa22.17■■□□□ 1.14
SH2D3A-201ENST00000245908 GABRDO14764 452 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 FYNP06241 537 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 TYK2P29597 1187 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 TKTL1P51854 596 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 SCAPQ12770 1279 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 FRG1Q14331 258 aaKnown RBP22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 PPM1JQ5JR12 505 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 CES3Q6UWW8 571 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 PDZD4Q76G19 769 aaPredicted RBP22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 ANKRD23Q86SG2 305 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 OR52K1Q8NGK4 314 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 DTX3LQ8TDB6 740 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 BRI3BPQ8WY22 251 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 LRRC40Q9H9A6 602 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 TMEM216Q9P0N5 145 aa22.16■■□□□ 1.14
SH2D3A-201ENST00000245908 FAM72CH0Y354 149 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 KCNK1O00180 336 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 CIB2O75838 187 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 AP2A1O95782 977 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 ERCC2P18074 760 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 GTF2A2P52657 109 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 PDCD2Q16342 344 aaPredicted RBP22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 FAM72AQ5TYM5 149 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 C9orf131Q5VYM1 1079 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 WSCD1Q658N2 575 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 FAM72DQ6L9T8 149 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 FAM72BQ86X60 149 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 PPP4R1Q8TF05 950 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 RBBP8Q99708 897 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 MED10Q9BTT4 135 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 WDR6Q9NNW5 1121 aaKnown RBP22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 SNX15Q9NRS6 342 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 DNAJC28Q9NX36 388 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 GNEQ9Y223 722 aaKnown RBP22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 NRP1O14786 923 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 FBXO21O94952 628 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 ALOX15P16050 662 aaPredicted RBP22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 KIAA0319Q5VV43 1072 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 ATG14Q6ZNE5 492 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 SLC7A14Q8TBB6 771 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 SCG3Q8WXD2 468 aaKnown RBP22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 THTPAQ9BU02 230 aa22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 APOBEC2Q9Y235 224 aaKnown RBP22.15■■□□□ 1.14
SH2D3A-201ENST00000245908 C9IYK1 514 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms