RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CHORDC1Q9UHD1 332 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 SPO11Q9Y5K1 396 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 COL11A1P12107 1806 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 CNTNAP2Q9UHC6 1331 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 GOLGA6L7A0A1B0GV03 622 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 TP73O15350 636 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 TTC4O95801 387 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 CALB1P05937 261 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 TGFB3P10600 412 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ATF2P15336 505 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 CHN1P15882 459 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 PTPN7P35236 360 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ADCYAP1R1P41586 468 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 KCNJ1P48048 391 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 NLRP11P59045 1033 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 NOP14P78316 857 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 TAP1Q03518 808 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 MCL1Q07820 350 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 IFT88Q13099 833 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 MAMLD1Q13495 774 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ITIH4Q14624 930 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 FAM160B1Q5W0V3 765 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 RPTNQ6XPR3 784 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 TRMT1LQ7Z2T5 733 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 CPLX4Q7Z7G2 160 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ZC3H18Q86VM9 953 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 WDR49Q8IV35 697 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 BRSK2Q8IWQ3 736 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 CHTF18Q8WVB6 975 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 FAXDC2Q96IV6 333 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 RBM41Q96IZ5 413 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 CABS1Q96KC9 395 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 FAM167AQ96KS9 214 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 MSTO1Q9BUK6 570 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 NSRP1Q9H0G5 558 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 CDC42EP4Q9H3Q1 356 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 AZI2Q9H6S1 392 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 APOBEC3GQ9HC16 384 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 INTS9Q9NV88 658 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 PARVAQ9NVD7 372 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 RIC8BQ9NVN3 520 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 ASIC3Q9UHC3 531 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 IP6K2Q9UHH9 426 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 NEU2Q9Y3R4 380 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 B3GALT1Q9Y5Z6 326 aa8.24□□□□□ -1.09
CXCR4-201ENST00000241393 MYH9P35579 1960 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 BRCA1P38398 1863 aaKnown RBP8.24□□□□□ -1.09
CXCR4-201ENST00000241393 TCRBV5S2A0A599 114 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 LRRIQ4A6NIV6 560 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 SCDO00767 359 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 ABHD2P08910 425 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 POU3F3P20264 500 aaPredicted RBP8.23□□□□□ -1.09
CXCR4-201ENST00000241393 FGFR4P22455 802 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 MMP8P22894 467 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 EDNRBP24530 442 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 YBX1P67809 324 aaKnown RBP8.23□□□□□ -1.09
CXCR4-201ENST00000241393 PRR5P85299 388 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 TMPRSS15P98073 1019 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 NEDD9Q14511 834 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 FYB2Q5VWT5 728 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 RCOR2Q8IZ40 523 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 RIBC1Q8N443 379 aaPredicted RBP8.23□□□□□ -1.09
CXCR4-201ENST00000241393 KIAA1958Q8N8K9 716 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 FEZF2Q8TBJ5 459 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 IPO4Q8TEX9 1081 aaKnown RBP8.23□□□□□ -1.09
CXCR4-201ENST00000241393 C1orf54Q8WWF1 131 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 CPA5Q8WXQ8 436 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 ZKSCAN4Q969J2 545 aaPredicted RBP8.23□□□□□ -1.09
CXCR4-201ENST00000241393 OSBPL8Q9BZF1 889 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 CD244Q9BZW8 370 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 LGALS13Q9UHV8 139 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 PTPN22Q9Y2R2 807 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 AFG3L2Q9Y4W6 797 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 CAPN7Q9Y6W3 813 aa8.23□□□□□ -1.09
CXCR4-201ENST00000241393 MAFO75444 373 aaPredicted RBP8.22□□□□□ -1.09
CXCR4-201ENST00000241393 TOM1L1O75674 476 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 ASS1P00966 412 aaKnown RBP8.22□□□□□ -1.09
CXCR4-201ENST00000241393 GSTA1P08263 222 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 PDGFRBP09619 1106 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 RALAP11233 206 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 CDH5P33151 784 aaPredicted RBP8.22□□□□□ -1.09
CXCR4-201ENST00000241393 FNTBP49356 437 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 ACOT2P49753 483 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 CDKN1CP49918 316 aaPredicted RBP8.22□□□□□ -1.09
CXCR4-201ENST00000241393 GALK1P51570 392 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 ALDH5A1P51649 535 aaPredicted RBP8.22□□□□□ -1.09
CXCR4-201ENST00000241393 YWHAEP62258 255 aaKnown RBP8.22□□□□□ -1.09
CXCR4-201ENST00000241393 SP2Q02086 613 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 ADCY1Q08828 1119 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 PLEKHN1Q494U1 663 aaPredicted RBP8.22□□□□□ -1.09
CXCR4-201ENST00000241393 GPR158Q5T848 1215 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 TMEM270Q6UE05 265 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 ZNF365Q70YC5 407 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 PIGWQ7Z7B1 504 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 CCDC197Q8NCU1 140 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 TCP11Q8WWU5 503 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 TMEM143Q96AN5 459 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 SCLT1Q96NL6 688 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 SELENOSQ9BQE4 189 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms