RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ECDO95905 644 aaPredicted RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 TAF5Q15542 800 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 FAXCQ5TGI0 409 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 ANKS6Q68DC2 871 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 FAM172AQ8WUF8 416 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 TSR3Q9UJK0 312 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 ERGIC3Q9Y282 383 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 TM7SF2O76062 418 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 CYP2F1P24903 491 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 RPL26P61254 145 aaKnown RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 PUDPQ08623 228 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 ACCSLQ4AC99 568 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 CLNKQ7Z7G1 428 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 FAM13CQ8NE31 585 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 GNG14A0A1W2PPG7 69 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 GSAPA4D1B5 854 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 DGCR6Q14129 220 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 ZFP69Q49AA0 526 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 PERM1Q5SV97 790 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 MFSD4BQ5TF39 518 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 ATG14Q6ZNE5 492 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 KIFC1Q9BW19 673 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 ARAP3Q8WWN8 1544 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 NR3C2P08235 984 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 CDC25CP30307 473 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 GALK1P51570 392 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 PGS1Q32NB8 556 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 SLC47A2Q86VL8 602 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 RAB43Q86YS6 212 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 HTR3CQ8WXA8 447 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 BBIP1A8MTZ0 92 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 CCNE2O96020 404 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 PRDX6P30041 224 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 FEN1P39748 380 aaKnown RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 ACADVLP49748 655 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 PSMD4P55036 377 aaKnown RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 SMIM11AP58511 58 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 TNFAIP8L3Q5GJ75 292 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 DHRS12A0PJE2 317 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 ATP6V1G1O75348 118 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 GRIA3P42263 894 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 PWP1Q13610 501 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 HHIPL2Q6UWX4 724 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 REPS1Q96D71 796 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 SENP2Q9HC62 589 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 AASDHPPTQ9NRN7 309 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 COL15A1P39059 1388 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 POLRMTO00411 1230 aaKnown RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 LYNP07948 512 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 NAMPTP43490 491 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 RFX5P48382 616 aaPredicted RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 CASP4P49662 377 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 MYO10Q9HD67 2058 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 NME5P56597 212 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 TMEM119Q4V9L6 283 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 RBM20Q5T481 1227 aaKnown RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 LEF1Q9UJU2 399 aaPredicted RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 PKNOX1P55347 436 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 SH3BP5LQ7L8J4 393 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 COLGALT1Q8NBJ5 622 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 TRNAU1APQ9NX07 287 aaKnown RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 DDIT4Q9NX09 232 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 ITGA2P17301 1181 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 TGM3Q08188 693 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 SCAIQ8N9R8 606 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 MRPL57Q9BQC6 102 aaKnown RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 UBQLN1Q9UMX0 589 aaKnown RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 IRGMA1A4Y4 181 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 PLA2G6O60733 806 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 ENTPD3O75355 529 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 ALDH6A1Q02252 535 aaKnown RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 NUDT18Q6ZVK8 323 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 SLC35C1Q96A29 364 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 MID1IP1Q9NPA3 183 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 CMTM6Q9NX76 183 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 AKAP7Q9P0M2 348 aaPredicted RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 DPPA5A6NC42 116 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 VCLP18206 1134 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 SSTR1P30872 391 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 SH3RF1Q7Z6J0 888 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 CBWD2Q8IUF1 395 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 MAGEE2Q8TD90 523 aaPredicted RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 BLOC1S5Q8TDH9 187 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 HPS1Q92902 700 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 DUSP9Q99956 384 aaKnown RBP8.37□□□□□ -1.07
APOB-201ENST00000233242 SALL3Q9BXA9 1300 aa8.37□□□□□ -1.07
APOB-201ENST00000233242 WDR27A2RRH5 827 aa8.36□□□□□ -1.07
APOB-201ENST00000233242 SLC37A4O43826 429 aa8.36□□□□□ -1.07
APOB-201ENST00000233242 SYNCRIPO60506 623 aaKnown RBP8.36□□□□□ -1.07
APOB-201ENST00000233242 BST1Q10588 318 aa8.36□□□□□ -1.07
APOB-201ENST00000233242 DPYSL3Q14195 570 aa8.36□□□□□ -1.07
APOB-201ENST00000233242 KAT6AQ92794 2004 aa8.36□□□□□ -1.07
APOB-201ENST00000233242 RAD17O75943 681 aa8.36□□□□□ -1.07
APOB-201ENST00000233242 NCAM1P13591 858 aa8.36□□□□□ -1.07
APOB-201ENST00000233242 PTPN11Q06124 597 aaPredicted RBP8.36□□□□□ -1.07
APOB-201ENST00000233242 NOTUMQ6P988 496 aa8.36□□□□□ -1.07
APOB-201ENST00000233242 ATP6V0D2Q8N8Y2 350 aa8.36□□□□□ -1.07
APOB-201ENST00000233242 INPP4AQ96PE3 977 aaPredicted RBP8.36□□□□□ -1.07
APOB-201ENST00000233242 WDCPQ9H6R7 721 aa8.36□□□□□ -1.07
APOB-201ENST00000233242 ACTR8Q9H981 624 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms