RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 PIK3R1P27986 724 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 CRABP2P29373 138 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 LRRC38Q5VT99 294 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 PACS1Q6VY07 963 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 RNF19BQ6ZMZ0 732 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 TTC30AQ86WT1 665 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 ACMSDQ8TDX5 336 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 AFG1LQ8WV93 481 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 RIBC2Q9H4K1 309 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 LIMD1Q9UGP4 676 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 CDH22Q9UJ99 828 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 C2orf71A6NGG8 1288 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 TXNP10599 105 aaKnown RBP14.08□□□□□ -0.16
HCFC2-201ENST00000229330 KDELR1P24390 212 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 BLVRAP53004 296 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 KLHL17Q6TDP4 642 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 SLFN11Q7Z7L1 901 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 HPS6Q86YV9 775 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 MARK4Q96L34 752 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 MAN1C1Q9NR34 630 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 ETNK2Q9NVF9 386 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 PRKAG3Q9UGI9 489 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 ADAM30Q9UKF2 790 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 ASTN1O14525 1302 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 CCDC154A6NI56 674 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 CENPXA8MT69 81 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 FOXO6A8MYZ6 492 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 EFCAB14O75071 495 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 PSEN1P49768 467 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 MARSP56192 900 aaKnown RBP14.08□□□□□ -0.16
HCFC2-201ENST00000229330 MYL6P60660 151 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 PPP3CAQ08209 521 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 MAMLD1Q13495 774 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 SPDYE7PQ495Y7 208 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 AARS2Q5JTZ9 985 aaKnown RBP14.08□□□□□ -0.16
HCFC2-201ENST00000229330 FAM71AQ8IYT1 594 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 SNX31Q8N9S9 440 aa14.08□□□□□ -0.16
HCFC2-201ENST00000229330 RBMX2Q9Y388 322 aaKnown RBP14.08□□□□□ -0.16
HCFC2-201ENST00000229330 TNFRSF21O75509 655 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 GABRB2P47870 512 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 TKFCQ3LXA3 575 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 ACSBG2Q5FVE4 666 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 C6orf52Q5T4I8 152 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 HTR3CQ8WXA8 447 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 TBCBQ99426 244 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 NUAK2Q9H093 628 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 PIH1D1Q9NWS0 290 aaKnown RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 MYOM1P52179 1685 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 KATNA1O75449 491 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 VAPBO95292 243 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 ZNF12P17014 697 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 RBL1P28749 1068 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 CD151P48509 253 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 PURAQ00577 322 aaKnown RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 KIAA1841Q6NSI8 718 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 CES3Q6UWW8 571 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 KRT73Q86Y46 540 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 ZNF276Q8N554 614 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 AMER2Q8N7J2 671 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 POLG2Q9UHN1 485 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 TRMT6Q9UJA5 497 aaKnown RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 SNRPB2P08579 225 aaKnown RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 TNK2Q07912 1038 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 C1DQ13901 141 aaKnown RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 ZIK1Q3SY52 487 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 PTRHD1Q6GMV3 140 aaKnown RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 ACP6Q9NPH0 428 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 NKX1-2Q9UD57 310 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 COQ6Q9Y2Z9 468 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 RPTORQ8N122 1335 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 TMEM191CA6NGB0 347 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 NCF1BA6NI72 391 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 NCF1CA8MVU1 366 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 WNT7AO00755 349 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 LYPLA1O75608 230 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 NCF1P14598 390 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-201ENST00000229330 PEX2P28328 305 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 SQLEQ14534 574 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 NFIL3Q16649 462 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 IER5Q5VY09 327 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 APOL5Q9BWW9 433 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 ENTPD7Q9NQZ7 604 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 GIN1Q9NXP7 522 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 WDR37Q9Y2I8 494 aa14.07□□□□□ -0.16
HCFC2-201ENST00000229330 TRIM43BA6NCK2 446 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 SLITRK3O94933 977 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 LSM3P62310 102 aaKnown RBP14.06□□□□□ -0.16
HCFC2-201ENST00000229330 FMO1Q01740 532 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 MSLNQ13421 630 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-201ENST00000229330 WDR49Q8IV35 697 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 MYO1HQ8N1T3 1032 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 BPIFB6Q8NFQ5 453 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 POMKQ9H5K3 350 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 EHD3Q9NZN3 535 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 SPATA2Q9UM82 520 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 VPS9D1Q9Y2B5 631 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 PCDHA11Q9Y5I1 949 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 SNPHO15079 494 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 HDAC3O15379 428 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 IL12AP29459 219 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms